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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.6
nTPM
Monaco:
83.7
nTPM
Schmiedel:
87.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.6
HPA sample
nTPM
gdT-cell nTPM: 25.8
Samples: 6
Max nTPM: 36.0
Min nTPM: 15.0
P10809_1007
15.0
P10809_1022
21.3
P10809_1041
36.0
P10809_1060
32.7
P10809_1077
30.7
P10809_1098
18.8
MAIT T-cell nTPM: 19.2
Samples: 6
Max nTPM: 25.0
Min nTPM: 8.0
P10809_1006
8.0
P10809_1024
17.0
P10809_1043
22.5
P10809_1062
22.9
P10809_1083
25.0
P10809_1097
19.5
Memory CD4 T-cell nTPM: 26.0
Samples: 6
Max nTPM: 43.5
Min nTPM: 17.2
P10809_1014
17.2
P10809_1026
43.5
P10809_1045
20.9
P10809_1064
30.7
P10809_1086
21.0
P10809_1113
22.9
Memory CD8 T-cell nTPM: 22.1
Samples: 5
Max nTPM: 29.8
Min nTPM: 13.5
P10809_1012
13.5
P10809_1027
29.8
P10809_1046
23.1
P10809_1065
27.7
P10809_1111
16.3
Naive CD4 T-cell nTPM: 27.5
Samples: 6
Max nTPM: 42.1
Min nTPM: 14.5
P10809_1015
14.5
P10809_1030
31.6
P10809_1049
42.1
P10809_1068
25.3
P10809_1085
29.3
P10809_1112
22.1
Naive CD8 T-cell nTPM: 22.2
Samples: 6
Max nTPM: 31.0
Min nTPM: 13.5
P10809_1016
17.2
P10809_1031
23.5
P10809_1050
31.0
P10809_1069
24.4
P10809_1087
23.6
P10809_1110
13.5
T-reg nTPM: 27.5
Samples: 6
Max nTPM: 33.1
Min nTPM: 16.7
P10809_1018
16.7
P10809_1037
28.2
P10809_1056
33.1
P10809_1075
26.2
P10809_1094
29.6
P10809_1106
31.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 61.6
Samples: 4
Max nTPM: 111.5
Min nTPM: 23.0
RHH5202_R3573
68.5
RHH5230_R3602
43.2
RHH5259_R3631
23.0
RHH5288_R3660
111.5
Effector memory CD8 T-cell nTPM: 68.7
Samples: 4
Max nTPM: 87.2
Min nTPM: 49.5
RHH5203_R3574
49.5
RHH5231_R3603
87.2
RHH5260_R3632
66.4
RHH5289_R3661
71.6
MAIT T-cell nTPM: 62.9
Samples: 4
Max nTPM: 79.5
Min nTPM: 48.4
RHH5233_R3605
63.0
RHH5205_R3576
60.8
RHH5262_R3634
48.4
RHH5297_R3663
79.5
Memory CD4 T-cell TFH nTPM: 79.9
Samples: 4
Max nTPM: 97.4
Min nTPM: 63.0
RHH5300_R3666
88.6
RHH5236_R3608
97.4
RHH5265_R3637
70.4
RHH5208_R3579
63.0
Memory CD4 T-cell Th1 nTPM: 63.2
Samples: 4
Max nTPM: 93.5
Min nTPM: 39.9
RHH5210_R3581
57.9
RHH5302_R3668
93.5
RHH5238_R3610
39.9
RHH5267_R3639
61.6
Memory CD4 T-cell Th1/Th17 nTPM: 56.9
Samples: 4
Max nTPM: 113.2
Min nTPM: 19.7
RHH5303_R3669
113.2
RHH5211_R3582
48.0
RHH5239_R3611
19.7
RHH5268_R3640
46.5
Memory CD4 T-cell Th17 nTPM: 57.4
Samples: 4
Max nTPM: 85.8
Min nTPM: 34.9
RHH5304_R3670
66.4
RHH5212_R3583
85.8
RHH5240_R3612
42.6
RHH5269_R3641
34.9
Memory CD4 T-cell Th2 nTPM: 81.6
Samples: 4
Max nTPM: 94.8
Min nTPM: 69.5
RHH5305_R3671
87.9
RHH5213_R3584
74.3
RHH5241_R3613
94.8
RHH5270_R3642
69.5
Naive CD4 T-cell nTPM: 70.0
Samples: 4
Max nTPM: 85.3
Min nTPM: 47.9
RHH5306_R3672
81.6
RHH5214_R3585
85.3
RHH5242_R3614
65.2
RHH5271_R3643
47.9
Naive CD8 T-cell nTPM: 73.2
Samples: 4
Max nTPM: 103.6
Min nTPM: 17.0
RHH5201_R3572
93.4
RHH5229_R3601
17.0
RHH5258_R3630
103.6
RHH5287_R3659
78.7
Non-Vd2 gdTCR nTPM: 73.2
Samples: 4
Max nTPM: 93.4
Min nTPM: 44.5
RHH5235_R3607
44.5
RHH5264_R3636
93.4
RHH5207_R3578
72.1
RHH5299_R3665
82.7
T-reg nTPM: 76.7
Samples: 4
Max nTPM: 110.7
Min nTPM: 44.7
RHH5301_R3667
87.1
RHH5237_R3609
110.7
RHH5266_R3638
64.3
RHH5209_R3580
44.7
Terminal effector memory CD4 T-cell nTPM: 83.8
Samples: 2
Max nTPM: 105.2
Min nTPM: 62.3
RHH5243_R3615
62.3
RHH5272_R3644
105.2
Terminal effector memory CD8 T-cell nTPM: 77.4
Samples: 4
Max nTPM: 97.6
Min nTPM: 44.4
RHH5232_R3604
86.7
RHH5204_R3575
81.0
RHH5261_R3633
44.4
RHH5296_R3662
97.6
Vd2 gdTCR nTPM: 57.6
Samples: 4
Max nTPM: 98.7
Min nTPM: 32.9
RHH5234_R3606
51.7
RHH5206_R3577
98.7
RHH5263_R3635
32.9
RHH5298_R3664
47.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
