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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
97.5
nTPM
Monaco:
371.3
nTPM
Schmiedel:
946.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.5
HPA sample
nTPM
gdT-cell nTPM: 41.6
Samples: 6
Max nTPM: 60.2
Min nTPM: 25.9
P10809_1007
44.1
P10809_1022
60.2
P10809_1041
49.1
P10809_1060
34.2
P10809_1077
35.8
P10809_1098
25.9
MAIT T-cell nTPM: 64.2
Samples: 6
Max nTPM: 91.5
Min nTPM: 53.2
P10809_1006
91.5
P10809_1024
73.2
P10809_1043
57.2
P10809_1062
56.7
P10809_1083
53.2
P10809_1097
53.2
Memory CD4 T-cell nTPM: 27.0
Samples: 6
Max nTPM: 30.9
Min nTPM: 15.3
P10809_1014
29.8
P10809_1026
26.4
P10809_1045
28.5
P10809_1064
30.8
P10809_1086
30.9
P10809_1113
15.3
Memory CD8 T-cell nTPM: 38.1
Samples: 5
Max nTPM: 46.1
Min nTPM: 24.6
P10809_1012
43.2
P10809_1027
42.0
P10809_1046
46.1
P10809_1065
34.4
P10809_1111
24.6
Naive CD4 T-cell nTPM: 10.0
Samples: 6
Max nTPM: 15.7
Min nTPM: 4.3
P10809_1015
8.9
P10809_1030
14.9
P10809_1049
8.4
P10809_1068
7.9
P10809_1085
15.7
P10809_1112
4.3
Naive CD8 T-cell nTPM: 15.2
Samples: 6
Max nTPM: 32.7
Min nTPM: 5.9
P10809_1016
6.7
P10809_1031
10.2
P10809_1050
18.1
P10809_1069
17.5
P10809_1087
32.7
P10809_1110
5.9
T-reg nTPM: 97.5
Samples: 6
Max nTPM: 124.1
Min nTPM: 71.5
P10809_1018
124.1
P10809_1037
99.7
P10809_1056
71.5
P10809_1075
91.3
P10809_1094
108.5
P10809_1106
89.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
371.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 194.0
Samples: 4
Max nTPM: 220.0
Min nTPM: 151.9
RHH5202_R3573
209.4
RHH5230_R3602
220.0
RHH5259_R3631
194.8
RHH5288_R3660
151.9
Effector memory CD8 T-cell nTPM: 262.7
Samples: 4
Max nTPM: 398.6
Min nTPM: 186.1
RHH5203_R3574
398.6
RHH5231_R3603
186.1
RHH5260_R3632
220.5
RHH5289_R3661
245.5
MAIT T-cell nTPM: 371.4
Samples: 4
Max nTPM: 491.4
Min nTPM: 269.0
RHH5233_R3605
447.6
RHH5205_R3576
491.4
RHH5262_R3634
277.4
RHH5297_R3663
269.0
Memory CD4 T-cell TFH nTPM: 93.2
Samples: 4
Max nTPM: 96.0
Min nTPM: 88.3
RHH5300_R3666
88.3
RHH5236_R3608
96.0
RHH5265_R3637
92.9
RHH5208_R3579
95.7
Memory CD4 T-cell Th1 nTPM: 164.2
Samples: 4
Max nTPM: 223.5
Min nTPM: 135.0
RHH5210_R3581
135.0
RHH5302_R3668
138.3
RHH5238_R3610
223.5
RHH5267_R3639
160.0
Memory CD4 T-cell Th1/Th17 nTPM: 220.0
Samples: 4
Max nTPM: 263.3
Min nTPM: 176.8
RHH5303_R3669
187.2
RHH5211_R3582
252.6
RHH5239_R3611
263.3
RHH5268_R3640
176.8
Memory CD4 T-cell Th17 nTPM: 135.7
Samples: 4
Max nTPM: 168.4
Min nTPM: 102.8
RHH5304_R3670
168.4
RHH5212_R3583
159.0
RHH5240_R3612
102.8
RHH5269_R3641
112.5
Memory CD4 T-cell Th2 nTPM: 35.8
Samples: 4
Max nTPM: 47.4
Min nTPM: 26.7
RHH5305_R3671
47.4
RHH5213_R3584
32.3
RHH5241_R3613
26.7
RHH5270_R3642
36.6
Naive CD4 T-cell nTPM: 53.7
Samples: 4
Max nTPM: 58.3
Min nTPM: 45.3
RHH5306_R3672
45.3
RHH5214_R3585
55.2
RHH5242_R3614
55.9
RHH5271_R3643
58.3
Naive CD8 T-cell nTPM: 47.7
Samples: 4
Max nTPM: 73.2
Min nTPM: 34.7
RHH5201_R3572
34.7
RHH5229_R3601
73.2
RHH5258_R3630
41.7
RHH5287_R3659
41.3
Non-Vd2 gdTCR nTPM: 164.1
Samples: 4
Max nTPM: 244.2
Min nTPM: 111.6
RHH5235_R3607
182.5
RHH5264_R3636
118.1
RHH5207_R3578
244.2
RHH5299_R3665
111.6
T-reg nTPM: 155.9
Samples: 4
Max nTPM: 173.8
Min nTPM: 142.7
RHH5301_R3667
150.5
RHH5237_R3609
156.4
RHH5266_R3638
142.7
RHH5209_R3580
173.8
Terminal effector memory CD4 T-cell nTPM: 219.0
Samples: 2
Max nTPM: 236.9
Min nTPM: 201.0
RHH5243_R3615
236.9
RHH5272_R3644
201.0
Terminal effector memory CD8 T-cell nTPM: 183.3
Samples: 4
Max nTPM: 192.6
Min nTPM: 174.4
RHH5232_R3604
174.4
RHH5204_R3575
181.9
RHH5261_R3633
184.1
RHH5296_R3662
192.6
Vd2 gdTCR nTPM: 250.1
Samples: 4
Max nTPM: 343.3
Min nTPM: 191.7
RHH5234_R3606
343.3
RHH5206_R3577
253.4
RHH5263_R3635
211.8
RHH5298_R3664
191.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
