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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
521.9
nTPM
Monaco:
70.7
nTPM
Schmiedel:
108.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
521.9
HPA sample
nTPM
gdT-cell nTPM: 294.2
Samples: 6
Max nTPM: 373.5
Min nTPM: 219.8
P10809_1007
219.8
P10809_1022
227.4
P10809_1041
346.1
P10809_1060
308.1
P10809_1077
373.5
P10809_1098
290.0
MAIT T-cell nTPM: 316.9
Samples: 6
Max nTPM: 413.6
Min nTPM: 175.6
P10809_1006
175.6
P10809_1024
374.3
P10809_1043
289.4
P10809_1062
312.7
P10809_1083
335.7
P10809_1097
413.6
Memory CD4 T-cell nTPM: 386.8
Samples: 6
Max nTPM: 482.8
Min nTPM: 266.4
P10809_1014
266.4
P10809_1026
368.8
P10809_1045
360.8
P10809_1064
433.2
P10809_1086
482.8
P10809_1113
408.9
Memory CD8 T-cell nTPM: 368.7
Samples: 5
Max nTPM: 440.9
Min nTPM: 227.5
P10809_1012
227.5
P10809_1027
421.5
P10809_1046
328.8
P10809_1065
424.8
P10809_1111
440.9
Naive CD4 T-cell nTPM: 378.7
Samples: 6
Max nTPM: 467.4
Min nTPM: 268.0
P10809_1015
268.0
P10809_1030
358.1
P10809_1049
467.4
P10809_1068
389.9
P10809_1085
420.1
P10809_1112
368.6
Naive CD8 T-cell nTPM: 372.0
Samples: 6
Max nTPM: 471.5
Min nTPM: 253.8
P10809_1016
253.8
P10809_1031
377.2
P10809_1050
381.1
P10809_1069
400.2
P10809_1087
471.5
P10809_1110
348.1
T-reg nTPM: 522.0
Samples: 6
Max nTPM: 618.3
Min nTPM: 343.3
P10809_1018
343.3
P10809_1037
618.3
P10809_1056
586.9
P10809_1075
512.9
P10809_1094
505.2
P10809_1106
565.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.7
Samples: 4
Max nTPM: 91.8
Min nTPM: 35.1
RHH5202_R3573
35.1
RHH5230_R3602
59.2
RHH5259_R3631
91.8
RHH5288_R3660
44.5
Effector memory CD8 T-cell nTPM: 43.8
Samples: 4
Max nTPM: 71.0
Min nTPM: 31.3
RHH5203_R3574
31.3
RHH5231_R3603
38.3
RHH5260_R3632
71.0
RHH5289_R3661
34.6
MAIT T-cell nTPM: 46.2
Samples: 4
Max nTPM: 54.4
Min nTPM: 37.9
RHH5233_R3605
37.9
RHH5205_R3576
54.4
RHH5262_R3634
53.1
RHH5297_R3663
39.2
Memory CD4 T-cell TFH nTPM: 45.8
Samples: 4
Max nTPM: 54.4
Min nTPM: 34.7
RHH5300_R3666
34.7
RHH5236_R3608
53.9
RHH5265_R3637
54.4
RHH5208_R3579
40.2
Memory CD4 T-cell Th1 nTPM: 70.7
Samples: 4
Max nTPM: 108.3
Min nTPM: 31.8
RHH5210_R3581
31.8
RHH5302_R3668
61.5
RHH5238_R3610
108.3
RHH5267_R3639
81.3
Memory CD4 T-cell Th1/Th17 nTPM: 65.9
Samples: 4
Max nTPM: 94.2
Min nTPM: 54.6
RHH5303_R3669
55.0
RHH5211_R3582
54.6
RHH5239_R3611
59.7
RHH5268_R3640
94.2
Memory CD4 T-cell Th17 nTPM: 49.3
Samples: 4
Max nTPM: 58.7
Min nTPM: 33.1
RHH5304_R3670
58.7
RHH5212_R3583
33.1
RHH5240_R3612
49.7
RHH5269_R3641
55.8
Memory CD4 T-cell Th2 nTPM: 50.2
Samples: 4
Max nTPM: 71.5
Min nTPM: 33.4
RHH5305_R3671
71.5
RHH5213_R3584
33.4
RHH5241_R3613
39.2
RHH5270_R3642
56.7
Naive CD4 T-cell nTPM: 63.5
Samples: 4
Max nTPM: 92.4
Min nTPM: 42.1
RHH5306_R3672
58.5
RHH5214_R3585
92.4
RHH5242_R3614
42.1
RHH5271_R3643
61.0
Naive CD8 T-cell nTPM: 52.3
Samples: 4
Max nTPM: 72.6
Min nTPM: 34.9
RHH5201_R3572
34.9
RHH5229_R3601
72.6
RHH5258_R3630
42.3
RHH5287_R3659
59.4
Non-Vd2 gdTCR nTPM: 50.9
Samples: 4
Max nTPM: 57.5
Min nTPM: 46.3
RHH5235_R3607
57.5
RHH5264_R3636
46.4
RHH5207_R3578
46.3
RHH5299_R3665
53.3
T-reg nTPM: 60.3
Samples: 4
Max nTPM: 65.9
Min nTPM: 53.7
RHH5301_R3667
64.7
RHH5237_R3609
53.7
RHH5266_R3638
56.8
RHH5209_R3580
65.9
Terminal effector memory CD4 T-cell nTPM: 50.3
Samples: 2
Max nTPM: 57.7
Min nTPM: 42.9
RHH5243_R3615
57.7
RHH5272_R3644
42.9
Terminal effector memory CD8 T-cell nTPM: 67.4
Samples: 4
Max nTPM: 103.3
Min nTPM: 41.2
RHH5232_R3604
41.2
RHH5204_R3575
103.3
RHH5261_R3633
79.2
RHH5296_R3662
45.8
Vd2 gdTCR nTPM: 62.7
Samples: 4
Max nTPM: 107.5
Min nTPM: 31.7
RHH5234_R3606
31.7
RHH5206_R3577
107.5
RHH5263_R3635
64.7
RHH5298_R3664
46.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
