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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
81.2
nTPM
Monaco:
417.3
nTPM
Schmiedel:
299.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.2
HPA sample
nTPM
gdT-cell nTPM: 22.7
Samples: 6
Max nTPM: 30.7
Min nTPM: 11.7
P10809_1007
22.9
P10809_1022
24.4
P10809_1041
30.7
P10809_1060
24.4
P10809_1077
11.7
P10809_1098
22.0
MAIT T-cell nTPM: 30.3
Samples: 6
Max nTPM: 46.2
Min nTPM: 22.6
P10809_1006
25.3
P10809_1024
46.2
P10809_1043
22.6
P10809_1062
30.1
P10809_1083
26.3
P10809_1097
31.5
Memory CD4 T-cell nTPM: 34.7
Samples: 6
Max nTPM: 43.3
Min nTPM: 27.9
P10809_1014
33.7
P10809_1026
43.3
P10809_1045
36.0
P10809_1064
31.6
P10809_1086
27.9
P10809_1113
35.7
Memory CD8 T-cell nTPM: 24.5
Samples: 5
Max nTPM: 25.8
Min nTPM: 22.6
P10809_1012
25.3
P10809_1027
25.8
P10809_1046
22.6
P10809_1065
23.5
P10809_1111
25.4
Naive CD4 T-cell nTPM: 81.2
Samples: 6
Max nTPM: 109.0
Min nTPM: 59.8
P10809_1015
72.3
P10809_1030
109.0
P10809_1049
77.6
P10809_1068
85.6
P10809_1085
59.8
P10809_1112
83.1
Naive CD8 T-cell nTPM: 62.0
Samples: 6
Max nTPM: 87.2
Min nTPM: 17.9
P10809_1016
87.2
P10809_1031
79.3
P10809_1050
58.2
P10809_1069
50.7
P10809_1087
17.9
P10809_1110
78.6
T-reg nTPM: 20.5
Samples: 6
Max nTPM: 28.9
Min nTPM: 15.2
P10809_1018
16.7
P10809_1037
15.2
P10809_1056
28.9
P10809_1075
20.5
P10809_1094
20.9
P10809_1106
20.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
417.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 152.2
Samples: 4
Max nTPM: 188.5
Min nTPM: 129.5
RHH5202_R3573
188.5
RHH5230_R3602
129.5
RHH5259_R3631
153.7
RHH5288_R3660
137.1
Effector memory CD8 T-cell nTPM: 51.8
Samples: 4
Max nTPM: 68.3
Min nTPM: 38.6
RHH5203_R3574
46.9
RHH5231_R3603
38.6
RHH5260_R3632
53.3
RHH5289_R3661
68.3
MAIT T-cell nTPM: 105.1
Samples: 4
Max nTPM: 145.4
Min nTPM: 88.7
RHH5233_R3605
96.1
RHH5205_R3576
90.0
RHH5262_R3634
145.4
RHH5297_R3663
88.7
Memory CD4 T-cell TFH nTPM: 172.1
Samples: 4
Max nTPM: 200.4
Min nTPM: 136.0
RHH5300_R3666
136.0
RHH5236_R3608
195.6
RHH5265_R3637
200.4
RHH5208_R3579
156.2
Memory CD4 T-cell Th1 nTPM: 177.0
Samples: 4
Max nTPM: 270.0
Min nTPM: 119.9
RHH5210_R3581
270.0
RHH5302_R3668
174.8
RHH5238_R3610
119.9
RHH5267_R3639
143.3
Memory CD4 T-cell Th1/Th17 nTPM: 141.9
Samples: 4
Max nTPM: 151.2
Min nTPM: 132.5
RHH5303_R3669
137.6
RHH5211_R3582
132.5
RHH5239_R3611
146.1
RHH5268_R3640
151.2
Memory CD4 T-cell Th17 nTPM: 115.6
Samples: 4
Max nTPM: 117.4
Min nTPM: 113.5
RHH5304_R3670
116.8
RHH5212_R3583
117.4
RHH5240_R3612
114.6
RHH5269_R3641
113.5
Memory CD4 T-cell Th2 nTPM: 127.5
Samples: 4
Max nTPM: 147.0
Min nTPM: 115.2
RHH5305_R3671
126.6
RHH5213_R3584
121.2
RHH5241_R3613
147.0
RHH5270_R3642
115.2
Naive CD4 T-cell nTPM: 354.4
Samples: 4
Max nTPM: 370.2
Min nTPM: 329.0
RHH5306_R3672
354.8
RHH5214_R3585
370.2
RHH5242_R3614
329.0
RHH5271_R3643
363.5
Naive CD8 T-cell nTPM: 417.3
Samples: 4
Max nTPM: 476.3
Min nTPM: 311.8
RHH5201_R3572
476.3
RHH5229_R3601
311.8
RHH5258_R3630
442.0
RHH5287_R3659
439.2
Non-Vd2 gdTCR nTPM: 41.4
Samples: 4
Max nTPM: 50.4
Min nTPM: 33.2
RHH5235_R3607
45.0
RHH5264_R3636
50.4
RHH5207_R3578
33.2
RHH5299_R3665
36.9
T-reg nTPM: 155.3
Samples: 4
Max nTPM: 173.7
Min nTPM: 143.0
RHH5301_R3667
143.0
RHH5237_R3609
156.0
RHH5266_R3638
148.3
RHH5209_R3580
173.7
Terminal effector memory CD4 T-cell nTPM: 86.3
Samples: 2
Max nTPM: 120.7
Min nTPM: 51.8
RHH5243_R3615
51.8
RHH5272_R3644
120.7
Terminal effector memory CD8 T-cell nTPM: 44.4
Samples: 4
Max nTPM: 53.0
Min nTPM: 33.2
RHH5232_R3604
42.2
RHH5204_R3575
33.2
RHH5261_R3633
53.0
RHH5296_R3662
49.0
Vd2 gdTCR nTPM: 92.2
Samples: 4
Max nTPM: 120.4
Min nTPM: 66.4
RHH5234_R3606
66.4
RHH5206_R3577
73.3
RHH5263_R3635
120.4
RHH5298_R3664
108.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
