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                                  TISSUE PRIMARY DATA RETINA Show tissue menu
                                  ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
                                  ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
                                  ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
                                  SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                  ANTIBODIES
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                                  VALIDATION
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                                  Tissue proteome
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                                  Retina
                                  RETINA - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  Consensus:12.9 nTPM
                                  GTEx:12.9 nTPM
                                  FANTOM5:16.9 Scaled Tags Per Million
                                  Pig:9.5 nTPM
                                  Mouse:9.6 nTPM

                                  RETINA - GTEx RNA-seqi

                                  RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                  Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 12.9
                                  GTEx sample id Sample description nTPM
                                  11.612.614.08.717.3024681012141618
                                  11.612.614.08.717.3024681012141618
                                  Retina
                                  Average nTPM: 12.9
                                  Samples: 105

                                  Max nTPM: 18.7
                                  Min nTPM: 8.7
                                  Std nTPM: 1.9
                                  Median nTPM:
                                  307_1 66 years, female 18.7
                                  2_1 77 years, female 18.1
                                  491_1 89 years, female 17.3
                                  315_1 62 years, female 17.0
                                  495_1 57 years, female 16.6
                                  501_1 88 years, male 16.2
                                  9_1 66 years, female 16.1
                                  266_1 85 years, male 16.1
                                  126_1 63 years, male 15.9
                                  137_1 83 years, male 15.8
                                  81_1 67 years, male 15.7
                                  321_1 62 years, female 15.4
                                  142_1 61 years, female 15.1
                                  162_1 79 years, female 15.1
                                  413_1 59 years, female 15.1
                                  32_1 67 years, male 15.0
                                  17_1 71 years, male 14.9
                                  414_1 84 years, female 14.7
                                  526_1 61 years, male 14.4
                                  264_1 73 years, female 14.3
                                  415_1 77 years, female 14.3
                                  518_1 75 years, female 14.3
                                  386_1 76 years, male 14.2
                                  406_1 79 years, male 14.2
                                  217_1 76 years, male 14.1
                                  42_1 85 years, male 14.0
                                  447_1 81 years, male 14.0
                                  311_1 78 years, male 13.9
                                  189_1 76 years, male 13.7
                                  319_1 81 years, male 13.7
                                  308_1 70 years, female 13.6
                                  480_1 63 years, male 13.6
                                  145_1 84 years, male 13.5
                                  35_1 74 years, female 13.4
                                  229_1 69 years, female 13.4
                                  313_1 79 years, female 13.4
                                  517_1 88 years, male 13.4
                                  109_1 81 years, female 13.3
                                  117_1 61 years, male 13.2
                                  288_1 66 years, female 13.2
                                  375_1 74 years, female 13.2
                                  499_1 55 years, female 13.1
                                  6_1 73 years, female 13.0
                                  89_1 63 years, male 13.0
                                  120_1 70 years, female 13.0
                                  314_1 67 years, male 13.0
                                  351_1 91 years, male 13.0
                                  115_1 83 years, male 12.9
                                  490_1 67 years, female 12.9
                                  377_1 82 years, female 12.8
                                  425_1 59 years, female 12.8
                                  254_1 77 years, female 12.7
                                  389_1 86 years, female 12.6
                                  466_1 57 years, female 12.6
                                  506_1 65 years, male 12.6
                                  316_1 62 years, male 12.5
                                  384_1 83 years, male 12.5
                                  153_1 70 years, female 12.4
                                  173_1 67 years, male 12.4
                                  322_1 76 years, male 12.4
                                  468_1 89 years, male 12.4
                                  4_1 88 years, female 12.3
                                  119_1 70 years, female 12.3
                                  320_1 89 years, female 12.3
                                  405_1 91 years, male 12.3
                                  18_1 88 years, male 12.2
                                  265_1 87 years, male 12.1
                                  404_1 82 years, female 12.1
                                  172_1 72 years, female 12.0
                                  292_1 71 years, male 12.0
                                  324_1 76 years, male 12.0
                                  349_1 83 years, male 12.0
                                  348_1 84 years, male 11.9
                                  350_1 84 years, female 11.8
                                  452_1 88 years, female 11.8
                                  251_1 78 years, male 11.7
                                  286_1 68 years, female 11.6
                                  379_1 60 years, male 11.6
                                  394_1 75 years, female 11.6
                                  246_1 77 years, male 11.5
                                  295_1 61 years, female 11.5
                                  317_1 60 years, male 11.5
                                  352_1 62 years, male 11.5
                                  149_1 88 years, male 11.4
                                  396_1 62 years, male 11.4
                                  139_1 64 years, female 11.3
                                  354_1 81 years, female 11.2
                                  503_1 68 years, male 11.1
                                  177_1 74 years, male 11.0
                                  335_1 73 years, female 10.8
                                  99_1 64 years, male 10.7
                                  163_1 78 years, male 10.7
                                  43_1 64 years, female 10.6
                                  293_1 68 years, female 10.6
                                  376_1 75 years, female 10.6
                                  237_1 82 years, male 10.5
                                  355_1 70 years, female 10.4
                                  318_1 68 years, male 10.1
                                  356_1 87 years, female 10.1
                                  41_1 94 years, female 9.9
                                  218_1 71 years, female 9.7
                                  243_1 75 years, male 9.7
                                  353_1 82 years, female 9.7
                                  291_1 76 years, male 8.9
                                  347_1 72 years, male 8.7
                                  Show allShow less

                                  RETINA - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 16.9
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Retina
                                  Scaled Tags Per Million: 16.9
                                  FF:10030-101E3 24-65 years, mixed 16.9

                                  RETINA - Pig RNA-seqi

                                  RNA-seq data obtained from pig brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 9.5
                                  Pig sample Sample description nTPM
                                  9.29.69.88.99.90123456789
                                  9.29.69.88.99.90123456789
                                  Retina
                                  nTPM: 9.5
                                  Samples: 4

                                  Max nTPM: 9.9
                                  Min nTPM: 8.9
                                  Sample A Female 8.9
                                  Sample B Female 9.3
                                  Sample C Male 9.9
                                  Sample D Male 9.8

                                  RETINA - Mouse RNA-seqi

                                  RNA-seq data obtained from mouse brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 9.6
                                  Mouse sample Sample description nTPM
                                  6.78.811.76.115.002468101214
                                  6.78.811.76.115.002468101214
                                  Retina
                                  nTPM: 9.7
                                  Samples: 4

                                  Max nTPM: 15.0
                                  Min nTPM: 6.1
                                  Sample A Male 6.9
                                  Sample B Male 10.6
                                  Sample C Female 6.1
                                  Sample D Female 15.0

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