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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
341.2
nTPM
FANTOM5:
289.1
Scaled Tags Per Million
Pig:
180.8
nTPM
Allen mouse:
12.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
341.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 162.3
2301
Female, age 85, both hemispheres
254.4
1984
Male, age 76, both hemispheres
155.3
2188
Female, age 91, both hemispheres
130.5
2090
Male, age 80, both hemispheres
108.8
Dorsal cochlear nucleus nTPM: 154.4
2058
Male, age 76, both hemispheres
181.4
2370
Male, age 61, both hemispheres
169.5
2187
Female, age 91, both hemispheres
167.4
2802
Male, age 74, right hemisphere
140.1
2378
Male, age 80, both hemispheres
113.6
Dorsal tegmental nucleus nTPM: 169.9
2358
Male, age 61, both hemispheres
200.6
2083
Male, age 80, both hemispheres
185.9
1936
Male, age 76, left hemisphere
166.7
2326
Male, age 74, both hemispheres
126.4
Dorsolateral tegmental area nTPM: 141.1
2141
Male, age 76, both hemispheres
200.0
2654
Male, age 80, both hemispheres
156.8
2751
Female, age 85, both hemispheres
138.6
2337
Male, age 61, both hemispheres
106.1
2360
Male, age 74, both hemispheres
103.9
Kolliker-Fuse nucleus nTPM: 218.5
2163
Male, age 80, both hemispheres
259.8
2793
Female, age 91, left hemisphere
241.4
2315
Male, age 76, right hemisphere
154.2
Lateral lemniscal nuclei nTPM: 298.5
2169
Male, age 76, both hemispheres
364.9
2453
Male, age 74, right hemisphere
335.4
2036
Male, age 80, both hemispheres
277.9
2320
Female, age 91, left hemisphere
272.6
2746
Female, age 85, left hemisphere
241.6
Lateral parabrachial nucleus nTPM: 190.6
2139
Female, age 85, right hemisphere
322.4
2790
Male, age 61, both hemispheres
175.0
2013
Male, age 80, both hemispheres
166.0
2792
Male, age 76, both hemispheres
99.1
Lateral vestibular nucleus nTPM: 246.3
2184
Male, age 76, both hemispheres
307.9
2311
Male, age 80, both hemispheres
184.7
Locus coeruleus nTPM: 259.0
2014
Male, age 55, unknown
282.4
2123
Female, age 91, both hemispheres
272.7
1980
Male, age 76, both hemispheres
267.0
2162
Male, age 80, both hemispheres
266.7
2720
Male, age 74, both hemispheres
260.1
2317
Female, age 72, unknown
235.2
2788
Male, age 74, unknown
228.6
Medial parabrachial nucleus nTPM: 187.5
2156
Male, age 61, both hemispheres
249.0
2854
Male, age 80, both hemispheres
203.6
2786
Male, age 76, both hemispheres
184.5
2170
Female, age 91, both hemispheres
165.8
2463
Female, age 85, right hemisphere
134.3
Medial periolivary nuclei nTPM: 263.0
2171
Female, age 85, both hemispheres
425.2
2063
Male, age 76, both hemispheres
321.8
2458
Female, age 91, both hemispheres
231.5
2791
Male, age 74, right hemisphere
186.8
2081
Male, age 80, both hemispheres
149.5
Motor facial nucleus nTPM: 284.1
2327
Male, age 80, both hemispheres
384.4
2062
Male, age 76, both hemispheres
339.7
2697
Female, age 85, both hemispheres
281.7
2795
Female, age 91, both hemispheres
278.0
2365
Male, age 74, right hemisphere
266.5
2126
Male, age 61, both hemispheres
154.1
Motor trigeminal nucleus nTPM: 221.7
2079
Male, age 80, both hemispheres
263.9
2335
Male, age 61, both hemispheres
224.6
2560
Male, age 74, both hemispheres
218.7
2321
Female, age 91, both hemispheres
205.9
2309
Male, age 76, both hemispheres
195.4
Nuclei of the trapezoid body nTPM: 301.7
2735
Female, age 85, both hemispheres
349.3
2159
Male, age 61, both hemispheres
321.4
1983
Male, age 76, both hemispheres
302.8
2368
Female, age 91, both hemispheres
287.1
2166
Male, age 80, both hemispheres
247.9
Nucleus raphe magnus nTPM: 341.2
2172
Female, age 85, both hemispheres
483.5
2160
Male, age 61, both hemispheres
381.4
2455
Male, age 74, both hemispheres
352.8
2328
Male, age 80, both hemispheres
330.9
2051
Male, age 76, both hemispheres
251.9
2459
Female, age 91, both hemispheres
246.4
Paramedian reticular nucleus nTPM: 216.4
2050
Female, age 85, both hemispheres
284.0
2313
Male, age 61, both hemispheres
252.8
2057
Male, age 80, both hemispheres
203.3
2052
Male, age 76, both hemispheres
125.6
Pedunculopontine tegmental nucleus nTPM: 174.6
2334
Male, age 80, both hemispheres
204.4
1921
Female, age 85, both hemispheres
172.1
2338
Male, age 61, both hemispheres
147.5
Pontine nuclei nTPM: 253.5
2787
Female, age 85, both hemispheres
459.8
1863
Male, age 55, unknown
306.9
1968
Male, age 76, left hemisphere
269.8
2727
Male, age 61, right hemisphere
255.2
2109
Female, age 72, unknown
238.8
2115
Male, age 80, left hemisphere
179.9
2454
Male, age 74, left hemisphere
172.5
2319
Female, age 91, both hemispheres
145.1
Pontine raphe nucleus nTPM: 245.2
2122
Female, age 85, midline
279.1
2853
Male, age 76, midline
211.3
Posteroventral cochlear nucleus nTPM: 144.9
2752
Female, age 85, both hemispheres
227.2
2070
Male, age 76, both hemispheres
195.2
2371
Male, age 61, both hemispheres
172.9
2341
Male, age 80, both hemispheres
80.9
2135
Female, age 91, both hemispheres
48.3
Principal sensory trigeminal nucleus nTPM: 281.7
2158
Male, age 61, both hemispheres
344.1
2324
Male, age 76, both hemispheres
314.9
2008
Male, age 80, left hemisphere
250.2
2367
Female, age 91, left hemisphere
217.6
Reticular pontine nucleus, caudal nTPM: 249.3
2332
Male, age 80, right hemisphere
422.9
2092
Male, age 76, both hemispheres
254.3
2457
Female, age 91, both hemispheres
208.5
2559
Male, age 74, both hemispheres
111.5
Reticular pontine nucleus, oral nTPM: 190.3
2361
Male, age 74, both hemispheres
220.8
2012
Female, age 85, both hemispheres
216.8
2366
Female, age 91, both hemispheres
195.6
2167
Male, age 76, both hemispheres
177.0
1939
Male, age 80, both hemispheres
141.4
Reticulotegmental nucleus nTPM: 240.5
2325
Male, age 76, both hemispheres
303.8
2333
Male, age 80, both hemispheres
227.4
2322
Female, age 91, both hemispheres
218.7
2452
Male, age 74, both hemispheres
211.9
Spinal trigeminal nucleus, oral nTPM: 224.6
2164
Male, age 80, both hemispheres
273.8
2737
Female, age 85, both hemispheres
218.9
1978
Male, age 76, both hemispheres
181.1
Subcoeruleus area nTPM: 197.0
2323
Female, age 91, left hemisphere
251.8
2089
Male, age 76, left hemisphere
250.0
1958
Male, age 80, both hemispheres
217.8
2451
Male, age 74, both hemispheres
153.1
2369
Female, age 85, left hemisphere
112.3
Superior olive nTPM: 261.4
2329
Male, age 80, right hemisphere
304.2
2561
Female, age 91, both hemispheres
292.5
1875
Female, age 85, both hemispheres
282.9
2020
Male, age 76, both hemispheres
218.2
2364
Male, age 74, right hemisphere
209.0
Ventral periolivary nuclei nTPM: 287.0
2165
Male, age 80, both hemispheres
349.3
2130
Female, age 85, both hemispheres
339.5
2794
Female, age 91, left hemisphere
265.8
2023
Male, age 76, both hemispheres
193.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 227.9
2449
Male, age 74, both hemispheres
307.7
2161
Male, age 80, both hemispheres
249.5
1959
Male, age 76, both hemispheres
234.2
2840
Female, age 85, both hemispheres
203.2
2456
Female, age 91, both hemispheres
188.7
2359
Male, age 61, both hemispheres
183.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
180.8
Pig sample
Sample description
nTPM
Pons nTPM: 180.8
Samples: 4
Max nTPM: 311.5
Min nTPM: 131.3
Sample A
Female
311.5
Sample B
Female
131.3
Sample C
Male
143.5
Sample D
Male
136.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
