HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:22.5 nTPM
HPA Brain:32.6 nTPM
GTEx:22.5 nTPM
FANTOM5:12.3 Scaled Tags Per Million
Pig:73.0 nTPM
Mouse:64.7 nTPM
Allen mouse:9.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054825
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.9
2148 Female, age 91, left hemisphere 29.5
1855 Male, age 76, left hemisphere 26.1
1898 Male, age 80, left hemisphere 22.1
2621 Female, age 67, right hemisphere 17.0
2529 Female, age 94, left hemisphere 15.3
1911 Female, age 85, right hemisphere 9.6
Dentate gyrus
nTPM: 23.5
2531 Female, age 67, both hemispheres 39.2
2246 Female, age 85, both hemispheres 27.1
2528 Male, age 74, both hemispheres 22.7
1927 Female, age 91, both hemispheres 19.7
2010 Male, age 76, both hemispheres 16.3
2530 Female, age 94, left hemisphere 15.9
Entorhinal gyrus
nTPM: 21.5
1787 Male, age 76, left hemisphere 25.1
2613 Female, age 94, left hemisphere 24.4
1938 Female, age 85, left hemisphere 22.3
2686 Male, age 75, right hemisphere 21.7
2764 Male, age 80, right hemisphere 20.7
2117 Female, age 91, right hemisphere 14.8
Hippocampus, CA1
nTPM: 23.0
2045 Male, age 76, both hemispheres 43.1
2082 Female, age 91, right hemisphere 30.2
1873 Female, age 85, both hemispheres 18.6
2527 Male, age 74, both hemispheres 18.0
2749 Male, age 80, left hemisphere 5.3
Hippocampus, CA2
nTPM: 16.4
1940 Female, age 85, left hemisphere 31.6
2437 Female, age 94, left hemisphere 21.1
2113 Female, age 91, right hemisphere 18.8
2249 Male, age 74, both hemispheres 10.4
1892 Male, age 76, both hemispheres 9.5
1963 Male, age 80, left hemisphere 6.8
Hippocampus, CA3
nTPM: 19.4
2620 Female, age 94, left hemisphere 41.1
2861 Female, age 67, both hemispheres 32.5
1891 Female, age 85, both hemispheres 15.0
2436 Male, age 74, both hemispheres 14.5
1867 Male, age 76, both hemispheres 8.1
2137 Male, age 80, left hemisphere 5.3
Parahippocampal cortex
nTPM: 22.8
1850 Male, age 80, both hemispheres 29.2
2250 Female, age 67, right hemisphere 28.4
2532 Female, age 72, left hemisphere 25.6
1933 Female, age 85, both hemispheres 25.1
2245 Female, age 91, both hemispheres 23.3
2693 Female, age 94, both hemispheres 22.7
1990 Female, age 91, right hemisphere 20.8
2622 Female, age 67, right hemisphere 20.6
2692 Male, age 74, both hemispheres 18.1
2018 Male, age 76, both hemispheres 13.8
Perirhinal gyrus
nTPM: 32.6
1847 Female, age 91, left hemisphere 41.6
1794 Male, age 80, right hemisphere 36.3
2521 Female, age 94, right hemisphere 36.2
1841 Female, age 85, right hemisphere 32.8
2848 Male, age 76, right hemisphere 16.1
Subiculum
nTPM: 16.6
2729 Female, age 91, right hemisphere 29.9
1977 Female, age 85, both hemispheres 21.9
2619 Male, age 74, both hemispheres 18.8
2438 Female, age 94, left hemisphere 17.6
1901 Male, age 80, both hemispheres 6.7
2042 Male, age 76, both hemispheres 4.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.5
Samples: 197

Max nTPM: 66.0
Min nTPM: 1.1
Std nTPM: 13.7
Median nTPM: 19.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 66.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 61.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 60.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 60.1
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 55.2
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 55.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 54.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 53.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 52.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 51.7
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 50.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.3
FF:10153-102I9 76 years, female 15.2
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.0
Pig sample Sample description nTPM
Subiculum
nTPM: 30.0
Samples: 4

Max nTPM: 36.4
Min nTPM: 21.1
Sample A Female 34.0
Sample B Female 28.5
Sample C Male 21.1
Sample D Male 36.4
Dorsal hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 69.8
Min nTPM: 29.4
Sample A Female 67.7
Sample B Female 69.8
Sample C Male 29.4
Sample D Male 67.6
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 96.6
Min nTPM: 58.2
Sample A Female 96.6
Sample B Female 77.3
Sample C Male 59.8
Sample D Male 58.2
Ventral hippocampus
nTPM: 53.4
Samples: 4

Max nTPM: 59.8
Min nTPM: 39.6
Sample A Female 57.4
Sample B Female 39.6
Sample C Male 59.8
Sample D Male 56.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.7
Samples: 4

Max nTPM: 77.4
Min nTPM: 46.5
Sample A Male 60.3
Sample B Male 74.6
Sample C Female 46.5
Sample D Female 77.4
Hippocampal formation
nTPM: 23.4
Samples: 4

Max nTPM: 33.3
Min nTPM: 16.3
Sample A Male 33.3
Sample B Male 19.2
Sample C Female 16.3
Sample D Female 24.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.6
71587832 Antisense, RP_050725_01_G06, Mouse strain C57BL/6J (56 days, male) 12.2
634453 Antisense, RP_040914_01_A03, Mouse strain C57BL/6J (56 days, male) 7.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org