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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.5
nTPM
Monaco:
55.4
nTPM
Schmiedel:
473.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.5
HPA sample
nTPM
gdT-cell nTPM: 16.5
Samples: 6
Max nTPM: 29.2
Min nTPM: 9.8
P10809_1007
12.9
P10809_1022
16.4
P10809_1041
9.8
P10809_1060
18.0
P10809_1077
29.2
P10809_1098
12.7
MAIT T-cell nTPM: 9.0
Samples: 6
Max nTPM: 17.4
Min nTPM: 3.7
P10809_1006
8.9
P10809_1024
9.2
P10809_1043
3.7
P10809_1062
8.0
P10809_1083
17.4
P10809_1097
6.9
Memory CD4 T-cell nTPM: 12.5
Samples: 6
Max nTPM: 27.2
Min nTPM: 6.8
P10809_1014
6.8
P10809_1026
8.9
P10809_1045
10.3
P10809_1064
13.0
P10809_1086
27.2
P10809_1113
8.9
Memory CD8 T-cell nTPM: 17.1
Samples: 5
Max nTPM: 20.9
Min nTPM: 12.2
P10809_1012
16.8
P10809_1027
20.9
P10809_1046
12.2
P10809_1065
20.0
P10809_1111
15.8
Naive CD4 T-cell nTPM: 3.1
Samples: 6
Max nTPM: 8.8
Min nTPM: 1.4
P10809_1015
1.9
P10809_1030
2.5
P10809_1049
2.0
P10809_1068
1.4
P10809_1085
8.8
P10809_1112
2.0
Naive CD8 T-cell nTPM: 12.7
Samples: 6
Max nTPM: 27.0
Min nTPM: 4.7
P10809_1016
4.7
P10809_1031
11.6
P10809_1050
8.6
P10809_1069
15.6
P10809_1087
27.0
P10809_1110
8.7
T-reg nTPM: 18.5
Samples: 6
Max nTPM: 26.4
Min nTPM: 15.1
P10809_1018
15.4
P10809_1037
15.1
P10809_1056
17.4
P10809_1075
16.8
P10809_1094
26.4
P10809_1106
19.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 23.9
Min nTPM: 6.1
RHH5202_R3573
6.1
RHH5230_R3602
11.7
RHH5259_R3631
23.9
RHH5288_R3660
15.6
Effector memory CD8 T-cell nTPM: 38.3
Samples: 4
Max nTPM: 42.8
Min nTPM: 33.5
RHH5203_R3574
36.5
RHH5231_R3603
33.5
RHH5260_R3632
40.5
RHH5289_R3661
42.8
MAIT T-cell nTPM: 19.7
Samples: 4
Max nTPM: 26.5
Min nTPM: 9.2
RHH5233_R3605
26.5
RHH5205_R3576
24.5
RHH5262_R3634
18.7
RHH5297_R3663
9.2
Memory CD4 T-cell TFH nTPM: 8.5
Samples: 4
Max nTPM: 10.6
Min nTPM: 4.3
RHH5300_R3666
9.3
RHH5236_R3608
4.3
RHH5265_R3637
9.9
RHH5208_R3579
10.6
Memory CD4 T-cell Th1 nTPM: 14.8
Samples: 4
Max nTPM: 21.8
Min nTPM: 6.3
RHH5210_R3581
6.3
RHH5302_R3668
12.5
RHH5238_R3610
18.5
RHH5267_R3639
21.8
Memory CD4 T-cell Th1/Th17 nTPM: 17.1
Samples: 4
Max nTPM: 25.4
Min nTPM: 8.4
RHH5303_R3669
21.0
RHH5211_R3582
8.4
RHH5239_R3611
13.4
RHH5268_R3640
25.4
Memory CD4 T-cell Th17 nTPM: 18.0
Samples: 4
Max nTPM: 27.5
Min nTPM: 9.9
RHH5304_R3670
16.5
RHH5212_R3583
9.9
RHH5240_R3612
27.5
RHH5269_R3641
18.2
Memory CD4 T-cell Th2 nTPM: 17.6
Samples: 4
Max nTPM: 20.2
Min nTPM: 14.1
RHH5305_R3671
16.7
RHH5213_R3584
14.1
RHH5241_R3613
19.2
RHH5270_R3642
20.2
Naive CD4 T-cell nTPM: 3.7
Samples: 4
Max nTPM: 4.3
Min nTPM: 3.2
RHH5306_R3672
3.9
RHH5214_R3585
4.3
RHH5242_R3614
3.2
RHH5271_R3643
3.4
Naive CD8 T-cell nTPM: 5.8
Samples: 4
Max nTPM: 10.7
Min nTPM: 0.9
RHH5201_R3572
0.9
RHH5229_R3601
5.2
RHH5258_R3630
6.5
RHH5287_R3659
10.7
Non-Vd2 gdTCR nTPM: 55.4
Samples: 4
Max nTPM: 88.4
Min nTPM: 33.6
RHH5235_R3607
88.4
RHH5264_R3636
40.1
RHH5207_R3578
59.6
RHH5299_R3665
33.6
T-reg nTPM: 15.3
Samples: 4
Max nTPM: 21.8
Min nTPM: 10.5
RHH5301_R3667
11.6
RHH5237_R3609
17.3
RHH5266_R3638
21.8
RHH5209_R3580
10.5
Terminal effector memory CD4 T-cell nTPM: 50.1
Samples: 2
Max nTPM: 51.5
Min nTPM: 48.7
RHH5243_R3615
51.5
RHH5272_R3644
48.7
Terminal effector memory CD8 T-cell nTPM: 46.8
Samples: 4
Max nTPM: 51.2
Min nTPM: 40.6
RHH5232_R3604
51.2
RHH5204_R3575
40.6
RHH5261_R3633
47.3
RHH5296_R3662
48.2
Vd2 gdTCR nTPM: 23.3
Samples: 4
Max nTPM: 28.3
Min nTPM: 13.2
RHH5234_R3606
25.2
RHH5206_R3577
26.5
RHH5263_R3635
28.3
RHH5298_R3664
13.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
