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MMS19
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  • MMS19
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

MMS19
Synonyms CIAO4, hMMS19, MET18, MMS19L
Gene descriptioni

Full gene name according to HGNC.

MMS19 homolog, cytosolic iron-sulfur assembly component
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband q24.1
Chromosome location (bp) 97458324 - 97498794
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000155229 (version 109)
Entrez gene 64210
HGNC HGNC:13824
UniProt Q96T76 (UniProt - Evidence at protein level)
neXtProt NX_Q96T76
GeneCards MMS19
Antibodypedia MMS19 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into apoproteins specifically involved in DNA metabolism and genomic integrity 1. In the CIA complex, MMS19 acts as an adapter between early-acting CIA components and a subset of cellular target iron-sulfur proteins such as ERCC2/XPD, FANCJ and RTEL1, thereby playing a key role in nucleotide excision repair (NER), homologous recombination-mediated double-strand break DNA repair, DNA replication and RNA polymerase II (POL II) transcription 2, 3, 4, 5. As part of the mitotic spindle-associated MMXD complex, plays a role in chromosome segregation, probably by facilitating iron-sulfur (Fe-S) cluster assembly into ERCC2/XPD 6. Together with CIAO2, facilitates the transfer of Fe-S clusters to the motor protein KIF4A, which ensures proper localization of KIF4A to mitotic machinery components to promote the progression of mitosis 7. Indirectly acts as a transcriptional coactivator of estrogen receptor (ER), via its role in iron-sulfur insertion into some component of the TFIIH-machinery 8.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Activator
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Chromosome partition, DNA damage, DNA repair, Transcription, Transcription regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables estrogen receptor binding activity and transcription coactivator activity. Involved in several processes, including iron-sulfur cluster assembly; positive regulation of nucleobase-containing compound metabolic process; and protein maturation by iron-sulfur cluster transfer. Located in cytosol; nucleoplasm; and spindle. Part of CIA complex and MMXD complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
MMS19-201
ENSP00000320059
ENST00000327238
Q96T76
[Direct mapping] MMS19 nucleotide excision repair protein homolog
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000160 [phosphorelay signal transduction system]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005675 [transcription factor TFIIH holo complex]
GO:0005737 [cytoplasm]
GO:0005815 [microtubule organizing center]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006259 [DNA metabolic process]
GO:0006281 [DNA repair]
GO:0006289 [nucleotide-excision repair]
GO:0006351 [DNA-templated transcription]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007059 [chromosome segregation]
GO:0009725 [response to hormone]
GO:0016020 [membrane]
GO:0016226 [iron-sulfur cluster assembly]
GO:0030159 [signaling receptor complex adaptor activity]
GO:0030331 [nuclear estrogen receptor binding]
GO:0030674 [protein-macromolecule adaptor activity]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0071817 [MMXD complex]
GO:0097361 [CIA complex]
GO:0097428 [protein maturation by iron-sulfur cluster transfer]
GO:1905168 [positive regulation of double-strand break repair via homologous recombination]
Show all
932 aa
102.6 kDa
No 0
MMS19-202
ENSP00000348097
ENST00000355839
Q96T76
[Direct mapping] MMS19 nucleotide excision repair protein homolog
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000160 [phosphorelay signal transduction system]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005675 [transcription factor TFIIH holo complex]
GO:0005737 [cytoplasm]
GO:0005815 [microtubule organizing center]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006259 [DNA metabolic process]
GO:0006281 [DNA repair]
GO:0006289 [nucleotide-excision repair]
GO:0006351 [DNA-templated transcription]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007059 [chromosome segregation]
GO:0009725 [response to hormone]
GO:0016020 [membrane]
GO:0016226 [iron-sulfur cluster assembly]
GO:0030159 [signaling receptor complex adaptor activity]
GO:0030331 [nuclear estrogen receptor binding]
GO:0030674 [protein-macromolecule adaptor activity]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0071817 [MMXD complex]
GO:0097361 [CIA complex]
GO:0097428 [protein maturation by iron-sulfur cluster transfer]
GO:1905168 [positive regulation of double-strand break repair via homologous recombination]
Show all
987 aa
108.4 kDa
No 0
MMS19-203
ENSP00000359818
ENST00000370782
Q96T76
[Direct mapping] MMS19 nucleotide excision repair protein homolog
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000160 [phosphorelay signal transduction system]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005675 [transcription factor TFIIH holo complex]
GO:0005737 [cytoplasm]
GO:0005815 [microtubule organizing center]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006259 [DNA metabolic process]
GO:0006281 [DNA repair]
GO:0006289 [nucleotide-excision repair]
GO:0006351 [DNA-templated transcription]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007059 [chromosome segregation]
GO:0009725 [response to hormone]
GO:0016020 [membrane]
GO:0016226 [iron-sulfur cluster assembly]
GO:0030159 [signaling receptor complex adaptor activity]
GO:0030331 [nuclear estrogen receptor binding]
GO:0030674 [protein-macromolecule adaptor activity]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0071817 [MMXD complex]
GO:0097361 [CIA complex]
GO:0097428 [protein maturation by iron-sulfur cluster transfer]
GO:1905168 [positive regulation of double-strand break repair via homologous recombination]
Show all
1030 aa
113.3 kDa
No 0
MMS19-205
ENSP00000391765
ENST00000422685
B0QZ77
[Direct mapping] MMS19 nucleotide excision repair protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005856 [cytoskeleton]
GO:0006281 [DNA repair]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016226 [iron-sulfur cluster assembly]
GO:0097361 [CIA complex]
GO:0097428 [protein maturation by iron-sulfur cluster transfer]
Show all
277 aa
30.7 kDa
No 0
MMS19-207
ENSP00000410008
ENST00000434538
H0Y746
[Direct mapping] MMS19 nucleotide excision repair protein
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006281 [DNA repair]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016226 [iron-sulfur cluster assembly]
GO:0097361 [CIA complex]
GO:0097428 [protein maturation by iron-sulfur cluster transfer]
Show all
598 aa
65.3 kDa
No 0
MMS19-208
ENSP00000409425
ENST00000437002
Q5T454
[Direct mapping] MMS19 nucleotide excision repair protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005856 [cytoskeleton]
GO:0006281 [DNA repair]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016226 [iron-sulfur cluster assembly]
GO:0097361 [CIA complex]
GO:0097428 [protein maturation by iron-sulfur cluster transfer]
Show all
302 aa
33.6 kDa
No 0
MMS19-209
ENSP00000412698
ENST00000438925
Q96T76
[Direct mapping] MMS19 nucleotide excision repair protein homolog
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000160 [phosphorelay signal transduction system]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005675 [transcription factor TFIIH holo complex]
GO:0005737 [cytoplasm]
GO:0005815 [microtubule organizing center]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006259 [DNA metabolic process]
GO:0006281 [DNA repair]
GO:0006289 [nucleotide-excision repair]
GO:0006351 [DNA-templated transcription]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007059 [chromosome segregation]
GO:0009725 [response to hormone]
GO:0016020 [membrane]
GO:0016226 [iron-sulfur cluster assembly]
GO:0019899 [enzyme binding]
GO:0030159 [signaling receptor complex adaptor activity]
GO:0030331 [nuclear estrogen receptor binding]
GO:0030674 [protein-macromolecule adaptor activity]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0071817 [MMXD complex]
GO:0097361 [CIA complex]
GO:0097428 [protein maturation by iron-sulfur cluster transfer]
GO:1905168 [positive regulation of double-strand break repair via homologous recombination]
Show all
1030 aa
113.3 kDa
No 0
MMS19-212
ENSP00000415326
ENST00000444411
H0Y7V3
[Direct mapping] MMS19 nucleotide excision repair protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005856 [cytoskeleton]
GO:0006281 [DNA repair]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016226 [iron-sulfur cluster assembly]
GO:0097361 [CIA complex]
GO:0097428 [protein maturation by iron-sulfur cluster transfer]
Show all
90 aa
9.9 kDa
No 0

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