HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:54.9 nTPM
HPA Brain:196.2 nTPM
GTEx:54.9 nTPM
FANTOM5:364.1 Scaled Tags Per Million
Pig:234.7 nTPM
Mouse:326.5 nTPM
Allen mouse:20.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035202
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 196.2
Sample id Sample description nTPM
Hippocampus
nTPM: 147.0
2148 Female, age 91, left hemisphere 189.8
2621 Female, age 67, right hemisphere 163.8
1855 Male, age 76, left hemisphere 160.9
1898 Male, age 80, left hemisphere 151.9
1911 Female, age 85, right hemisphere 142.3
2529 Female, age 94, left hemisphere 73.4
Dentate gyrus
nTPM: 153.3
1927 Female, age 91, both hemispheres 293.3
2010 Male, age 76, both hemispheres 143.1
2531 Female, age 67, both hemispheres 137.4
2528 Male, age 74, both hemispheres 135.0
2246 Female, age 85, both hemispheres 127.6
2530 Female, age 94, left hemisphere 83.6
Entorhinal gyrus
nTPM: 75.2
2764 Male, age 80, right hemisphere 89.0
2686 Male, age 75, right hemisphere 80.1
1938 Female, age 85, left hemisphere 76.8
2613 Female, age 94, left hemisphere 74.9
1787 Male, age 76, left hemisphere 68.2
2117 Female, age 91, right hemisphere 62.2
Hippocampus, CA1
nTPM: 196.2
2749 Male, age 80, left hemisphere 332.3
2045 Male, age 76, both hemispheres 189.3
1873 Female, age 85, both hemispheres 169.8
2527 Male, age 74, both hemispheres 152.1
2082 Female, age 91, right hemisphere 137.5
Hippocampus, CA2
nTPM: 132.8
1892 Male, age 76, both hemispheres 203.0
1963 Male, age 80, left hemisphere 178.7
2249 Male, age 74, both hemispheres 152.7
2113 Female, age 91, right hemisphere 128.2
1940 Female, age 85, left hemisphere 79.1
2437 Female, age 94, left hemisphere 55.5
Hippocampus, CA3
nTPM: 173.8
2137 Male, age 80, left hemisphere 297.4
2620 Female, age 94, left hemisphere 192.9
1867 Male, age 76, both hemispheres 163.2
2436 Male, age 74, both hemispheres 150.5
2861 Female, age 67, both hemispheres 143.6
1891 Female, age 85, both hemispheres 95.4
Parahippocampal cortex
nTPM: 91.1
2245 Female, age 91, both hemispheres 159.3
2250 Female, age 67, right hemisphere 107.0
2693 Female, age 94, both hemispheres 104.5
2018 Male, age 76, both hemispheres 103.0
1850 Male, age 80, both hemispheres 91.8
1933 Female, age 85, both hemispheres 78.6
1990 Female, age 91, right hemisphere 72.7
2532 Female, age 72, left hemisphere 71.7
2622 Female, age 67, right hemisphere 70.9
2692 Male, age 74, both hemispheres 51.5
Perirhinal gyrus
nTPM: 97.6
1847 Female, age 91, left hemisphere 139.3
2521 Female, age 94, right hemisphere 101.7
1794 Male, age 80, right hemisphere 90.5
2848 Male, age 76, right hemisphere 84.8
1841 Female, age 85, right hemisphere 71.5
Subiculum
nTPM: 88.0
1901 Male, age 80, both hemispheres 134.9
2042 Male, age 76, both hemispheres 115.5
2729 Female, age 91, right hemisphere 101.7
1977 Female, age 85, both hemispheres 68.4
2619 Male, age 74, both hemispheres 65.3
2438 Female, age 94, left hemisphere 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.9
Samples: 197

Max nTPM: 154.7
Min nTPM: 0.5
Std nTPM: 36.4
Median nTPM: 45.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 154.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 146.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 144.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 142.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 139.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 136.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 134.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 131.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 130.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 124.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 123.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 364.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 364.1
FF:10169-103B7 60 years, female 451.7
FF:10153-102I9 76 years, female 276.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 234.7
Pig sample Sample description nTPM
Subiculum
nTPM: 96.9
Samples: 4

Max nTPM: 123.1
Min nTPM: 72.5
Sample A Female 104.4
Sample B Female 87.4
Sample C Male 123.1
Sample D Male 72.5
Dorsal hippocampus
nTPM: 234.7
Samples: 4

Max nTPM: 278.7
Min nTPM: 184.2
Sample A Female 278.7
Sample B Female 268.8
Sample C Male 184.2
Sample D Male 207.0
Entorhinal cortex
nTPM: 74.0
Samples: 4

Max nTPM: 83.1
Min nTPM: 66.5
Sample A Female 76.3
Sample B Female 66.5
Sample C Male 83.1
Sample D Male 70.1
Ventral hippocampus
nTPM: 191.1
Samples: 4

Max nTPM: 300.0
Min nTPM: 131.8
Sample A Female 161.6
Sample B Female 131.8
Sample C Male 170.8
Sample D Male 300.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 326.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 140.6
Samples: 4

Max nTPM: 191.2
Min nTPM: 97.1
Sample A Male 133.5
Sample B Male 97.1
Sample C Female 191.2
Sample D Female 140.5
Hippocampal formation
nTPM: 326.5
Samples: 4

Max nTPM: 391.1
Min nTPM: 267.4
Sample A Male 278.2
Sample B Male 369.3
Sample C Female 391.1
Sample D Female 267.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.7
79591719 Antisense, RP_071218_02_B10, Mouse strain C57BL/6J (56 days, male) 21.1
81790722 Antisense, RP_090820_01_A05, Mouse strain C57BL/6J (56 days, male) 20.3

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