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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
135.5
nTPM
Monaco:
185.6
nTPM
Schmiedel:
142.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
135.5
HPA sample
nTPM
gdT-cell nTPM: 130.6
Samples: 6
Max nTPM: 192.1
Min nTPM: 84.0
P10809_1007
102.9
P10809_1022
160.4
P10809_1041
192.1
P10809_1060
84.0
P10809_1077
99.4
P10809_1098
144.5
MAIT T-cell nTPM: 135.5
Samples: 6
Max nTPM: 174.6
Min nTPM: 90.2
P10809_1006
126.7
P10809_1024
148.6
P10809_1043
174.6
P10809_1062
111.7
P10809_1083
90.2
P10809_1097
161.3
Memory CD4 T-cell nTPM: 84.0
Samples: 6
Max nTPM: 104.5
Min nTPM: 74.7
P10809_1014
76.1
P10809_1026
80.0
P10809_1045
87.4
P10809_1064
74.7
P10809_1086
81.2
P10809_1113
104.5
Memory CD8 T-cell nTPM: 100.3
Samples: 5
Max nTPM: 128.6
Min nTPM: 79.1
P10809_1012
91.4
P10809_1027
89.8
P10809_1046
128.6
P10809_1065
79.1
P10809_1111
112.7
Naive CD4 T-cell nTPM: 77.3
Samples: 6
Max nTPM: 94.6
Min nTPM: 63.9
P10809_1015
63.9
P10809_1030
76.5
P10809_1049
68.1
P10809_1068
66.4
P10809_1085
94.1
P10809_1112
94.6
Naive CD8 T-cell nTPM: 83.0
Samples: 6
Max nTPM: 94.6
Min nTPM: 56.5
P10809_1016
56.5
P10809_1031
80.9
P10809_1050
94.6
P10809_1069
81.2
P10809_1087
92.8
P10809_1110
92.0
T-reg nTPM: 69.0
Samples: 6
Max nTPM: 82.8
Min nTPM: 51.5
P10809_1018
63.0
P10809_1037
75.4
P10809_1056
82.8
P10809_1075
51.5
P10809_1094
62.6
P10809_1106
78.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 108.4
Samples: 4
Max nTPM: 127.7
Min nTPM: 81.7
RHH5202_R3573
81.7
RHH5230_R3602
115.1
RHH5259_R3631
127.7
RHH5288_R3660
109.0
Effector memory CD8 T-cell nTPM: 155.0
Samples: 4
Max nTPM: 180.7
Min nTPM: 121.1
RHH5203_R3574
121.1
RHH5231_R3603
149.5
RHH5260_R3632
168.6
RHH5289_R3661
180.7
MAIT T-cell nTPM: 185.6
Samples: 4
Max nTPM: 221.3
Min nTPM: 143.0
RHH5233_R3605
179.4
RHH5205_R3576
221.3
RHH5262_R3634
198.5
RHH5297_R3663
143.0
Memory CD4 T-cell TFH nTPM: 94.7
Samples: 4
Max nTPM: 105.6
Min nTPM: 80.5
RHH5300_R3666
80.5
RHH5236_R3608
96.7
RHH5265_R3637
96.1
RHH5208_R3579
105.6
Memory CD4 T-cell Th1 nTPM: 109.9
Samples: 4
Max nTPM: 129.5
Min nTPM: 101.9
RHH5210_R3581
104.8
RHH5302_R3668
101.9
RHH5238_R3610
103.4
RHH5267_R3639
129.5
Memory CD4 T-cell Th1/Th17 nTPM: 147.3
Samples: 4
Max nTPM: 162.1
Min nTPM: 116.5
RHH5303_R3669
157.3
RHH5211_R3582
153.4
RHH5239_R3611
162.1
RHH5268_R3640
116.5
Memory CD4 T-cell Th17 nTPM: 153.0
Samples: 4
Max nTPM: 189.5
Min nTPM: 135.2
RHH5304_R3670
144.6
RHH5212_R3583
142.6
RHH5240_R3612
189.5
RHH5269_R3641
135.2
Memory CD4 T-cell Th2 nTPM: 143.6
Samples: 4
Max nTPM: 166.1
Min nTPM: 118.0
RHH5305_R3671
151.6
RHH5213_R3584
166.1
RHH5241_R3613
118.0
RHH5270_R3642
138.5
Naive CD4 T-cell nTPM: 100.9
Samples: 4
Max nTPM: 111.0
Min nTPM: 93.6
RHH5306_R3672
93.6
RHH5214_R3585
98.5
RHH5242_R3614
100.4
RHH5271_R3643
111.0
Naive CD8 T-cell nTPM: 96.3
Samples: 4
Max nTPM: 110.5
Min nTPM: 81.1
RHH5201_R3572
110.5
RHH5229_R3601
105.6
RHH5258_R3630
87.8
RHH5287_R3659
81.1
Non-Vd2 gdTCR nTPM: 158.6
Samples: 4
Max nTPM: 213.2
Min nTPM: 108.4
RHH5235_R3607
213.2
RHH5264_R3636
138.6
RHH5207_R3578
174.2
RHH5299_R3665
108.4
T-reg nTPM: 93.9
Samples: 4
Max nTPM: 124.1
Min nTPM: 80.4
RHH5301_R3667
80.4
RHH5237_R3609
124.1
RHH5266_R3638
84.7
RHH5209_R3580
86.5
Terminal effector memory CD4 T-cell nTPM: 129.4
Samples: 2
Max nTPM: 148.0
Min nTPM: 110.8
RHH5243_R3615
148.0
RHH5272_R3644
110.8
Terminal effector memory CD8 T-cell nTPM: 131.2
Samples: 4
Max nTPM: 165.8
Min nTPM: 104.1
RHH5232_R3604
137.7
RHH5204_R3575
104.1
RHH5261_R3633
165.8
RHH5296_R3662
117.0
Vd2 gdTCR nTPM: 162.8
Samples: 4
Max nTPM: 207.5
Min nTPM: 122.0
RHH5234_R3606
137.8
RHH5206_R3577
183.7
RHH5263_R3635
207.5
RHH5298_R3664
122.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
