HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.3 nTPM
HPA Brain:119.2 nTPM
GTEx:24.3 nTPM
FANTOM5:77.2 Scaled Tags Per Million
Mouse:28.3 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 119.2
Sample id Sample description nTPM
Hippocampus
nTPM: 109.0
2148 Female, age 91, left hemisphere 129.9
2529 Female, age 94, left hemisphere 126.6
2621 Female, age 67, right hemisphere 107.7
1898 Male, age 80, left hemisphere 98.5
1855 Male, age 76, left hemisphere 96.2
1911 Female, age 85, right hemisphere 95.4
Dentate gyrus
nTPM: 105.7
2530 Female, age 94, left hemisphere 116.6
2531 Female, age 67, both hemispheres 116.1
1927 Female, age 91, both hemispheres 113.6
2528 Male, age 74, both hemispheres 109.1
2246 Female, age 85, both hemispheres 100.2
2010 Male, age 76, both hemispheres 78.3
Entorhinal gyrus
nTPM: 119.2
2686 Male, age 75, right hemisphere 140.0
2613 Female, age 94, left hemisphere 138.4
1938 Female, age 85, left hemisphere 117.3
2764 Male, age 80, right hemisphere 110.2
1787 Male, age 76, left hemisphere 108.5
2117 Female, age 91, right hemisphere 100.7
Hippocampus, CA1
nTPM: 96.4
1873 Female, age 85, both hemispheres 110.5
2527 Male, age 74, both hemispheres 101.2
2045 Male, age 76, both hemispheres 97.5
2082 Female, age 91, right hemisphere 86.5
2749 Male, age 80, left hemisphere 86.1
Hippocampus, CA2
nTPM: 95.6
2437 Female, age 94, left hemisphere 104.2
1892 Male, age 76, both hemispheres 101.3
2113 Female, age 91, right hemisphere 96.9
1940 Female, age 85, left hemisphere 94.8
1963 Male, age 80, left hemisphere 94.5
2249 Male, age 74, both hemispheres 82.0
Hippocampus, CA3
nTPM: 109.2
2861 Female, age 67, both hemispheres 155.6
2620 Female, age 94, left hemisphere 144.8
1891 Female, age 85, both hemispheres 99.1
1867 Male, age 76, both hemispheres 97.4
2137 Male, age 80, left hemisphere 92.5
2436 Male, age 74, both hemispheres 66.0
Parahippocampal cortex
nTPM: 113.4
2622 Female, age 67, right hemisphere 159.4
2692 Male, age 74, both hemispheres 128.4
1850 Male, age 80, both hemispheres 118.6
2245 Female, age 91, both hemispheres 115.5
2532 Female, age 72, left hemisphere 112.6
2250 Female, age 67, right hemisphere 107.1
1990 Female, age 91, right hemisphere 103.8
1933 Female, age 85, both hemispheres 100.8
2693 Female, age 94, both hemispheres 100.6
2018 Male, age 76, both hemispheres 86.9
Perirhinal gyrus
nTPM: 109.3
1794 Male, age 80, right hemisphere 118.9
1841 Female, age 85, right hemisphere 113.7
2848 Male, age 76, right hemisphere 112.0
1847 Female, age 91, left hemisphere 110.1
2521 Female, age 94, right hemisphere 91.9
Subiculum
nTPM: 97.9
2619 Male, age 74, both hemispheres 123.1
2729 Female, age 91, right hemisphere 108.1
2438 Female, age 94, left hemisphere 105.1
1977 Female, age 85, both hemispheres 92.2
1901 Male, age 80, both hemispheres 82.5
2042 Male, age 76, both hemispheres 76.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.3
Samples: 197

Max nTPM: 55.7
Min nTPM: 6.1
Std nTPM: 7.9
Median nTPM: 24.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 44.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 44.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 41.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 41.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 40.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 39.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 39.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 38.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 38.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 37.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.2
FF:10153-102I9 76 years, female 92.1
FF:10169-103B7 60 years, female 62.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.3
Samples: 4

Max nTPM: 30.9
Min nTPM: 26.2
Sample A Male 28.3
Sample B Male 27.9
Sample C Female 26.2
Sample D Female 30.9
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 26.5
Min nTPM: 22.0
Sample A Male 23.6
Sample B Male 26.5
Sample C Female 24.7
Sample D Female 22.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
72182988 Antisense, RP_050915_04_G02, Mouse strain C57BL/6J (56 days, male) 7.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org