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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
260.0
nTPM
FANTOM5:
387.1
Scaled Tags Per Million
Pig:
140.0
nTPM
Allen mouse:
4.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
260.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 239.1
2188
Female, age 91, both hemispheres
306.4
2090
Male, age 80, both hemispheres
256.7
2301
Female, age 85, both hemispheres
256.2
1984
Male, age 76, both hemispheres
137.2
Dorsal cochlear nucleus nTPM: 206.6
2187
Female, age 91, both hemispheres
234.0
2378
Male, age 80, both hemispheres
231.7
2802
Male, age 74, right hemisphere
226.8
2058
Male, age 76, both hemispheres
174.6
2370
Male, age 61, both hemispheres
165.8
Dorsal tegmental nucleus nTPM: 179.6
2083
Male, age 80, both hemispheres
210.6
2326
Male, age 74, both hemispheres
201.3
1936
Male, age 76, left hemisphere
161.2
2358
Male, age 61, both hemispheres
145.3
Dorsolateral tegmental area nTPM: 196.2
2751
Female, age 85, both hemispheres
236.1
2337
Male, age 61, both hemispheres
235.1
2654
Male, age 80, both hemispheres
216.1
2360
Male, age 74, both hemispheres
165.5
2141
Male, age 76, both hemispheres
128.4
Kolliker-Fuse nucleus nTPM: 227.4
2793
Female, age 91, left hemisphere
319.2
2163
Male, age 80, both hemispheres
203.5
2315
Male, age 76, right hemisphere
159.6
Lateral lemniscal nuclei nTPM: 256.4
2320
Female, age 91, left hemisphere
290.8
2036
Male, age 80, both hemispheres
269.9
2169
Male, age 76, both hemispheres
248.9
2746
Female, age 85, left hemisphere
238.8
2453
Male, age 74, right hemisphere
233.6
Lateral parabrachial nucleus nTPM: 239.4
2792
Male, age 76, both hemispheres
279.5
2013
Male, age 80, both hemispheres
253.8
2139
Female, age 85, right hemisphere
229.7
2790
Male, age 61, both hemispheres
194.7
Lateral vestibular nucleus nTPM: 202.2
2311
Male, age 80, both hemispheres
207.3
2184
Male, age 76, both hemispheres
197.1
Locus coeruleus nTPM: 144.3
2720
Male, age 74, both hemispheres
181.1
2162
Male, age 80, both hemispheres
180.3
2123
Female, age 91, both hemispheres
133.2
2317
Female, age 72, unknown
133.2
2788
Male, age 74, unknown
128.4
1980
Male, age 76, both hemispheres
126.9
2014
Male, age 55, unknown
126.7
Medial parabrachial nucleus nTPM: 207.6
2854
Male, age 80, both hemispheres
261.6
2170
Female, age 91, both hemispheres
221.1
2463
Female, age 85, right hemisphere
198.2
2786
Male, age 76, both hemispheres
191.4
2156
Male, age 61, both hemispheres
165.8
Medial periolivary nuclei nTPM: 237.2
2458
Female, age 91, both hemispheres
271.8
2081
Male, age 80, both hemispheres
271.1
2791
Male, age 74, right hemisphere
243.0
2063
Male, age 76, both hemispheres
207.2
2171
Female, age 85, both hemispheres
192.9
Motor facial nucleus nTPM: 238.9
2697
Female, age 85, both hemispheres
286.9
2365
Male, age 74, right hemisphere
283.6
2327
Male, age 80, both hemispheres
243.2
2126
Male, age 61, both hemispheres
225.7
2795
Female, age 91, both hemispheres
203.0
2062
Male, age 76, both hemispheres
190.9
Motor trigeminal nucleus nTPM: 226.0
2321
Female, age 91, both hemispheres
267.2
2560
Male, age 74, both hemispheres
261.1
2079
Male, age 80, both hemispheres
240.3
2309
Male, age 76, both hemispheres
186.6
2335
Male, age 61, both hemispheres
174.6
Nuclei of the trapezoid body nTPM: 223.4
2166
Male, age 80, both hemispheres
266.4
2159
Male, age 61, both hemispheres
255.2
2368
Female, age 91, both hemispheres
230.3
1983
Male, age 76, both hemispheres
185.3
2735
Female, age 85, both hemispheres
179.8
Nucleus raphe magnus nTPM: 227.4
2459
Female, age 91, both hemispheres
289.1
2328
Male, age 80, both hemispheres
258.7
2455
Male, age 74, both hemispheres
222.3
2051
Male, age 76, both hemispheres
207.5
2160
Male, age 61, both hemispheres
194.0
2172
Female, age 85, both hemispheres
192.5
Paramedian reticular nucleus nTPM: 198.3
2050
Female, age 85, both hemispheres
213.7
2052
Male, age 76, both hemispheres
212.8
2057
Male, age 80, both hemispheres
195.7
2313
Male, age 61, both hemispheres
171.1
Pedunculopontine tegmental nucleus nTPM: 201.2
2338
Male, age 61, both hemispheres
241.2
2334
Male, age 80, both hemispheres
193.0
1921
Female, age 85, both hemispheres
169.3
Pontine nuclei nTPM: 255.5
2454
Male, age 74, left hemisphere
302.4
2319
Female, age 91, both hemispheres
287.0
1863
Male, age 55, unknown
279.3
2109
Female, age 72, unknown
251.7
2115
Male, age 80, left hemisphere
251.3
1968
Male, age 76, left hemisphere
233.8
2787
Female, age 85, both hemispheres
230.0
2727
Male, age 61, right hemisphere
208.4
Pontine raphe nucleus nTPM: 199.9
2122
Female, age 85, midline
217.2
2853
Male, age 76, midline
182.5
Posteroventral cochlear nucleus nTPM: 234.9
2135
Female, age 91, both hemispheres
322.2
2341
Male, age 80, both hemispheres
255.7
2070
Male, age 76, both hemispheres
222.1
2752
Female, age 85, both hemispheres
195.7
2371
Male, age 61, both hemispheres
179.1
Principal sensory trigeminal nucleus nTPM: 222.9
2367
Female, age 91, left hemisphere
297.7
2008
Male, age 80, left hemisphere
216.3
2158
Male, age 61, both hemispheres
190.6
2324
Male, age 76, both hemispheres
187.0
Reticular pontine nucleus, caudal nTPM: 251.1
2457
Female, age 91, both hemispheres
274.3
2559
Male, age 74, both hemispheres
267.1
2092
Male, age 76, both hemispheres
236.7
2332
Male, age 80, right hemisphere
226.2
Reticular pontine nucleus, oral nTPM: 260.0
2361
Male, age 74, both hemispheres
318.0
2366
Female, age 91, both hemispheres
312.9
2012
Female, age 85, both hemispheres
237.1
1939
Male, age 80, both hemispheres
217.4
2167
Male, age 76, both hemispheres
214.7
Reticulotegmental nucleus nTPM: 211.0
2452
Male, age 74, both hemispheres
236.0
2322
Female, age 91, both hemispheres
224.3
2333
Male, age 80, both hemispheres
203.4
2325
Male, age 76, both hemispheres
180.4
Spinal trigeminal nucleus, oral nTPM: 191.1
2164
Male, age 80, both hemispheres
223.8
1978
Male, age 76, both hemispheres
185.9
2737
Female, age 85, both hemispheres
163.5
Subcoeruleus area nTPM: 210.5
2369
Female, age 85, left hemisphere
262.9
2089
Male, age 76, left hemisphere
227.7
1958
Male, age 80, both hemispheres
200.8
2451
Male, age 74, both hemispheres
192.0
2323
Female, age 91, left hemisphere
168.9
Superior olive nTPM: 258.3
2329
Male, age 80, right hemisphere
269.7
2561
Female, age 91, both hemispheres
262.6
2364
Male, age 74, right hemisphere
258.5
2020
Male, age 76, both hemispheres
253.0
1875
Female, age 85, both hemispheres
247.6
Ventral periolivary nuclei nTPM: 229.9
2023
Male, age 76, both hemispheres
264.0
2794
Female, age 91, left hemisphere
230.6
2165
Male, age 80, both hemispheres
216.2
2130
Female, age 85, both hemispheres
209.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 236.9
2456
Female, age 91, both hemispheres
255.7
2840
Female, age 85, both hemispheres
253.0
2161
Male, age 80, both hemispheres
234.5
2449
Male, age 74, both hemispheres
232.5
1959
Male, age 76, both hemispheres
222.9
2359
Male, age 61, both hemispheres
222.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
140.0
Pig sample
Sample description
nTPM
Pons nTPM: 140.0
Samples: 4
Max nTPM: 199.3
Min nTPM: 98.5
Sample A
Female
148.3
Sample B
Female
98.5
Sample C
Male
114.0
Sample D
Male
199.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
