HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:83.1 nTPM
HPA Brain:172.8 nTPM
GTEx:83.1 nTPM
FANTOM5:145.6 Scaled Tags Per Million
Pig:131.6 nTPM
Mouse:28.7 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 172.8
Sample id Sample description nTPM
Hippocampus
nTPM: 114.7
2621 Female, age 67, right hemisphere 143.1
1911 Female, age 85, right hemisphere 130.5
2529 Female, age 94, left hemisphere 124.2
1898 Male, age 80, left hemisphere 100.5
1855 Male, age 76, left hemisphere 99.9
2148 Female, age 91, left hemisphere 90.0
Dentate gyrus
nTPM: 121.4
2530 Female, age 94, left hemisphere 190.5
2010 Male, age 76, both hemispheres 127.1
2528 Male, age 74, both hemispheres 123.9
2246 Female, age 85, both hemispheres 111.0
2531 Female, age 67, both hemispheres 92.4
1927 Female, age 91, both hemispheres 83.6
Entorhinal gyrus
nTPM: 150.1
2613 Female, age 94, left hemisphere 179.2
2117 Female, age 91, right hemisphere 176.9
2764 Male, age 80, right hemisphere 155.6
1787 Male, age 76, left hemisphere 144.5
1938 Female, age 85, left hemisphere 139.3
2686 Male, age 75, right hemisphere 105.0
Hippocampus, CA1
nTPM: 101.2
2749 Male, age 80, left hemisphere 123.9
2082 Female, age 91, right hemisphere 118.7
2527 Male, age 74, both hemispheres 108.1
1873 Female, age 85, both hemispheres 105.7
2045 Male, age 76, both hemispheres 49.6
Hippocampus, CA2
nTPM: 142.0
1940 Female, age 85, left hemisphere 167.7
2437 Female, age 94, left hemisphere 165.7
1963 Male, age 80, left hemisphere 143.5
2249 Male, age 74, both hemispheres 129.7
2113 Female, age 91, right hemisphere 128.1
1892 Male, age 76, both hemispheres 117.2
Hippocampus, CA3
nTPM: 99.6
1891 Female, age 85, both hemispheres 152.4
1867 Male, age 76, both hemispheres 130.9
2137 Male, age 80, left hemisphere 126.7
2436 Male, age 74, both hemispheres 97.5
2861 Female, age 67, both hemispheres 53.2
2620 Female, age 94, left hemisphere 37.1
Parahippocampal cortex
nTPM: 132.5
2532 Female, age 72, left hemisphere 174.9
1990 Female, age 91, right hemisphere 170.2
2692 Male, age 74, both hemispheres 150.2
1850 Male, age 80, both hemispheres 141.3
2245 Female, age 91, both hemispheres 140.6
2018 Male, age 76, both hemispheres 135.2
1933 Female, age 85, both hemispheres 119.2
2693 Female, age 94, both hemispheres 115.4
2250 Female, age 67, right hemisphere 101.4
2622 Female, age 67, right hemisphere 77.0
Perirhinal gyrus
nTPM: 127.8
2521 Female, age 94, right hemisphere 155.8
1847 Female, age 91, left hemisphere 130.5
1841 Female, age 85, right hemisphere 129.2
1794 Male, age 80, right hemisphere 122.5
2848 Male, age 76, right hemisphere 101.2
Subiculum
nTPM: 172.8
2042 Male, age 76, both hemispheres 211.4
2438 Female, age 94, left hemisphere 211.1
1901 Male, age 80, both hemispheres 200.5
1977 Female, age 85, both hemispheres 157.8
2619 Male, age 74, both hemispheres 150.5
2729 Female, age 91, right hemisphere 105.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.1
Samples: 197

Max nTPM: 223.2
Min nTPM: 20.8
Std nTPM: 31.0
Median nTPM: 82.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 223.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 167.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 161.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 159.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 153.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 143.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 136.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 135.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 133.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 132.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 129.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 145.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 145.6
FF:10153-102I9 76 years, female 162.4
FF:10169-103B7 60 years, female 128.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 131.6
Pig sample Sample description nTPM
Subiculum
nTPM: 75.5
Samples: 4

Max nTPM: 84.8
Min nTPM: 60.1
Sample A Female 84.5
Sample B Female 72.4
Sample C Male 60.1
Sample D Male 84.8
Dorsal hippocampus
nTPM: 100.5
Samples: 4

Max nTPM: 129.8
Min nTPM: 80.1
Sample A Female 129.8
Sample B Female 91.0
Sample C Male 101.2
Sample D Male 80.1
Entorhinal cortex
nTPM: 131.6
Samples: 4

Max nTPM: 142.1
Min nTPM: 119.9
Sample A Female 138.3
Sample B Female 142.1
Sample C Male 119.9
Sample D Male 125.9
Ventral hippocampus
nTPM: 74.6
Samples: 4

Max nTPM: 102.8
Min nTPM: 50.4
Sample A Female 71.9
Sample B Female 50.4
Sample C Male 73.3
Sample D Male 102.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 34.4
Min nTPM: 26.6
Sample A Male 27.2
Sample B Male 26.6
Sample C Female 26.6
Sample D Female 34.4
Hippocampal formation
nTPM: 18.3
Samples: 4

Max nTPM: 20.0
Min nTPM: 16.1
Sample A Male 19.5
Sample B Male 16.1
Sample C Female 20.0
Sample D Female 17.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
70743907 Antisense, RP_050725_02_A11, Mouse strain C57BL/6J (56 days, male) 2.9
67792193 Antisense, RP_040920_01_C11, Mouse strain C57BL/6J (56 days, male) 1.5

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