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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.3
nTPM
Monaco:
322.1
nTPM
Schmiedel:
62.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.3
HPA sample
nTPM
gdT-cell nTPM: 33.3
Samples: 6
Max nTPM: 48.8
Min nTPM: 24.0
P10809_1007
31.8
P10809_1022
37.7
P10809_1041
48.8
P10809_1060
31.6
P10809_1077
24.0
P10809_1098
25.6
MAIT T-cell nTPM: 33.9
Samples: 6
Max nTPM: 43.6
Min nTPM: 24.8
P10809_1006
35.9
P10809_1024
31.3
P10809_1043
43.6
P10809_1062
41.7
P10809_1083
25.9
P10809_1097
24.8
Memory CD4 T-cell nTPM: 52.3
Samples: 6
Max nTPM: 63.3
Min nTPM: 41.6
P10809_1014
41.6
P10809_1026
46.6
P10809_1045
63.3
P10809_1064
51.4
P10809_1086
48.2
P10809_1113
62.6
Memory CD8 T-cell nTPM: 36.6
Samples: 5
Max nTPM: 47.7
Min nTPM: 25.0
P10809_1012
38.2
P10809_1027
25.0
P10809_1046
47.7
P10809_1065
34.1
P10809_1111
38.2
Naive CD4 T-cell nTPM: 47.2
Samples: 6
Max nTPM: 54.4
Min nTPM: 37.3
P10809_1015
37.3
P10809_1030
42.4
P10809_1049
43.8
P10809_1068
53.0
P10809_1085
52.4
P10809_1112
54.4
Naive CD8 T-cell nTPM: 36.4
Samples: 6
Max nTPM: 41.1
Min nTPM: 29.2
P10809_1016
30.9
P10809_1031
38.1
P10809_1050
41.1
P10809_1069
41.0
P10809_1087
29.2
P10809_1110
38.3
T-reg nTPM: 47.9
Samples: 6
Max nTPM: 58.3
Min nTPM: 33.7
P10809_1018
45.3
P10809_1037
58.3
P10809_1056
33.7
P10809_1075
46.6
P10809_1094
49.9
P10809_1106
53.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
322.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 189.7
Samples: 4
Max nTPM: 268.9
Min nTPM: 130.5
RHH5202_R3573
187.4
RHH5230_R3602
130.5
RHH5259_R3631
268.9
RHH5288_R3660
171.9
Effector memory CD8 T-cell nTPM: 198.2
Samples: 4
Max nTPM: 222.3
Min nTPM: 177.7
RHH5203_R3574
212.7
RHH5231_R3603
180.1
RHH5260_R3632
177.7
RHH5289_R3661
222.3
MAIT T-cell nTPM: 165.6
Samples: 4
Max nTPM: 193.2
Min nTPM: 143.6
RHH5233_R3605
193.2
RHH5205_R3576
172.0
RHH5262_R3634
143.6
RHH5297_R3663
153.7
Memory CD4 T-cell TFH nTPM: 322.2
Samples: 4
Max nTPM: 395.0
Min nTPM: 281.1
RHH5300_R3666
301.0
RHH5236_R3608
281.1
RHH5265_R3637
395.0
RHH5208_R3579
311.5
Memory CD4 T-cell Th1 nTPM: 254.4
Samples: 4
Max nTPM: 282.9
Min nTPM: 224.7
RHH5210_R3581
224.7
RHH5302_R3668
249.7
RHH5238_R3610
282.9
RHH5267_R3639
260.3
Memory CD4 T-cell Th1/Th17 nTPM: 229.7
Samples: 4
Max nTPM: 281.7
Min nTPM: 190.1
RHH5303_R3669
209.1
RHH5211_R3582
190.1
RHH5239_R3611
281.7
RHH5268_R3640
237.8
Memory CD4 T-cell Th17 nTPM: 197.9
Samples: 4
Max nTPM: 211.3
Min nTPM: 179.3
RHH5304_R3670
209.4
RHH5212_R3583
179.3
RHH5240_R3612
191.5
RHH5269_R3641
211.3
Memory CD4 T-cell Th2 nTPM: 229.5
Samples: 4
Max nTPM: 251.8
Min nTPM: 194.6
RHH5305_R3671
242.0
RHH5213_R3584
194.6
RHH5241_R3613
251.8
RHH5270_R3642
229.4
Naive CD4 T-cell nTPM: 209.3
Samples: 4
Max nTPM: 251.1
Min nTPM: 182.9
RHH5306_R3672
182.9
RHH5214_R3585
207.9
RHH5242_R3614
251.1
RHH5271_R3643
195.4
Naive CD8 T-cell nTPM: 155.4
Samples: 4
Max nTPM: 169.2
Min nTPM: 137.6
RHH5201_R3572
168.6
RHH5229_R3601
169.2
RHH5258_R3630
146.2
RHH5287_R3659
137.6
Non-Vd2 gdTCR nTPM: 123.9
Samples: 4
Max nTPM: 174.6
Min nTPM: 102.6
RHH5235_R3607
102.6
RHH5264_R3636
104.4
RHH5207_R3578
174.6
RHH5299_R3665
113.8
T-reg nTPM: 186.7
Samples: 4
Max nTPM: 201.9
Min nTPM: 174.1
RHH5301_R3667
201.9
RHH5237_R3609
175.3
RHH5266_R3638
195.3
RHH5209_R3580
174.1
Terminal effector memory CD4 T-cell nTPM: 191.1
Samples: 2
Max nTPM: 209.2
Min nTPM: 173.0
RHH5243_R3615
209.2
RHH5272_R3644
173.0
Terminal effector memory CD8 T-cell nTPM: 152.7
Samples: 4
Max nTPM: 181.5
Min nTPM: 129.7
RHH5232_R3604
141.1
RHH5204_R3575
129.7
RHH5261_R3633
158.3
RHH5296_R3662
181.5
Vd2 gdTCR nTPM: 136.3
Samples: 4
Max nTPM: 147.8
Min nTPM: 124.7
RHH5234_R3606
137.5
RHH5206_R3577
135.1
RHH5263_R3635
147.8
RHH5298_R3664
124.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
