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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.5
nTPM
Monaco:
21.9
nTPM
Schmiedel:
28.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.5
HPA sample
nTPM
gdT-cell nTPM: 19.3
Samples: 6
Max nTPM: 24.9
Min nTPM: 14.5
P10809_1007
14.5
P10809_1022
17.9
P10809_1041
17.7
P10809_1060
24.9
P10809_1077
23.0
P10809_1098
17.9
MAIT T-cell nTPM: 23.0
Samples: 6
Max nTPM: 34.6
Min nTPM: 9.4
P10809_1006
9.4
P10809_1024
23.2
P10809_1043
17.1
P10809_1062
23.1
P10809_1083
30.8
P10809_1097
34.6
Memory CD4 T-cell nTPM: 23.3
Samples: 6
Max nTPM: 32.7
Min nTPM: 15.6
P10809_1014
15.6
P10809_1026
20.3
P10809_1045
20.2
P10809_1064
27.7
P10809_1086
32.7
P10809_1113
23.2
Memory CD8 T-cell nTPM: 24.4
Samples: 5
Max nTPM: 34.6
Min nTPM: 16.1
P10809_1012
16.1
P10809_1027
25.4
P10809_1046
18.2
P10809_1065
34.6
P10809_1111
27.5
Naive CD4 T-cell nTPM: 34.5
Samples: 6
Max nTPM: 47.1
Min nTPM: 21.7
P10809_1015
21.7
P10809_1030
36.7
P10809_1049
41.6
P10809_1068
29.4
P10809_1085
47.1
P10809_1112
30.5
Naive CD8 T-cell nTPM: 24.8
Samples: 6
Max nTPM: 29.6
Min nTPM: 16.5
P10809_1016
16.5
P10809_1031
27.1
P10809_1050
25.4
P10809_1069
26.3
P10809_1087
29.6
P10809_1110
23.9
T-reg nTPM: 28.4
Samples: 6
Max nTPM: 36.2
Min nTPM: 15.8
P10809_1018
15.8
P10809_1037
33.1
P10809_1056
36.2
P10809_1075
33.7
P10809_1094
26.8
P10809_1106
24.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.4
Samples: 4
Max nTPM: 22.0
Min nTPM: 5.3
RHH5202_R3573
10.4
RHH5230_R3602
5.3
RHH5259_R3631
11.7
RHH5288_R3660
22.0
Effector memory CD8 T-cell nTPM: 17.6
Samples: 4
Max nTPM: 22.3
Min nTPM: 14.3
RHH5203_R3574
22.3
RHH5231_R3603
15.0
RHH5260_R3632
14.3
RHH5289_R3661
18.7
MAIT T-cell nTPM: 14.0
Samples: 4
Max nTPM: 23.4
Min nTPM: 7.1
RHH5233_R3605
15.4
RHH5205_R3576
7.1
RHH5262_R3634
10.2
RHH5297_R3663
23.4
Memory CD4 T-cell TFH nTPM: 16.4
Samples: 4
Max nTPM: 17.7
Min nTPM: 15.0
RHH5300_R3666
15.5
RHH5236_R3608
17.7
RHH5265_R3637
17.5
RHH5208_R3579
15.0
Memory CD4 T-cell Th1 nTPM: 15.1
Samples: 4
Max nTPM: 23.9
Min nTPM: 9.0
RHH5210_R3581
23.9
RHH5302_R3668
15.6
RHH5238_R3610
9.0
RHH5267_R3639
11.9
Memory CD4 T-cell Th1/Th17 nTPM: 16.2
Samples: 4
Max nTPM: 20.1
Min nTPM: 11.6
RHH5303_R3669
19.6
RHH5211_R3582
20.1
RHH5239_R3611
13.6
RHH5268_R3640
11.6
Memory CD4 T-cell Th17 nTPM: 10.0
Samples: 4
Max nTPM: 12.2
Min nTPM: 7.4
RHH5304_R3670
12.2
RHH5212_R3583
7.4
RHH5240_R3612
9.3
RHH5269_R3641
10.9
Memory CD4 T-cell Th2 nTPM: 17.1
Samples: 4
Max nTPM: 20.8
Min nTPM: 13.7
RHH5305_R3671
15.7
RHH5213_R3584
20.8
RHH5241_R3613
18.0
RHH5270_R3642
13.7
Naive CD4 T-cell nTPM: 21.6
Samples: 4
Max nTPM: 30.9
Min nTPM: 15.1
RHH5306_R3672
17.9
RHH5214_R3585
30.9
RHH5242_R3614
22.4
RHH5271_R3643
15.1
Naive CD8 T-cell nTPM: 17.8
Samples: 4
Max nTPM: 26.6
Min nTPM: 9.5
RHH5201_R3572
26.6
RHH5229_R3601
11.0
RHH5258_R3630
24.1
RHH5287_R3659
9.5
Non-Vd2 gdTCR nTPM: 20.4
Samples: 4
Max nTPM: 25.3
Min nTPM: 12.3
RHH5235_R3607
12.3
RHH5264_R3636
21.9
RHH5207_R3578
25.3
RHH5299_R3665
21.9
T-reg nTPM: 21.9
Samples: 4
Max nTPM: 25.2
Min nTPM: 19.5
RHH5301_R3667
22.3
RHH5237_R3609
25.2
RHH5266_R3638
19.5
RHH5209_R3580
20.7
Terminal effector memory CD4 T-cell nTPM: 18.1
Samples: 2
Max nTPM: 23.3
Min nTPM: 12.9
RHH5243_R3615
12.9
RHH5272_R3644
23.3
Terminal effector memory CD8 T-cell nTPM: 21.0
Samples: 4
Max nTPM: 25.9
Min nTPM: 15.6
RHH5232_R3604
25.9
RHH5204_R3575
25.2
RHH5261_R3633
15.6
RHH5296_R3662
17.2
Vd2 gdTCR nTPM: 14.2
Samples: 4
Max nTPM: 22.6
Min nTPM: 8.6
RHH5234_R3606
8.6
RHH5206_R3577
22.6
RHH5263_R3635
8.7
RHH5298_R3664
16.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
