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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
100.2
nTPM
Monaco:
106.2
nTPM
Schmiedel:
98.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.2
HPA sample
nTPM
gdT-cell nTPM: 74.7
Samples: 6
Max nTPM: 89.3
Min nTPM: 60.8
P10809_1007
60.8
P10809_1022
78.2
P10809_1041
82.2
P10809_1060
72.0
P10809_1077
65.4
P10809_1098
89.3
MAIT T-cell nTPM: 72.9
Samples: 6
Max nTPM: 81.8
Min nTPM: 61.4
P10809_1006
75.8
P10809_1024
81.8
P10809_1043
61.4
P10809_1062
73.5
P10809_1083
70.1
P10809_1097
74.5
Memory CD4 T-cell nTPM: 77.3
Samples: 6
Max nTPM: 97.0
Min nTPM: 55.6
P10809_1014
69.7
P10809_1026
83.4
P10809_1045
97.0
P10809_1064
55.6
P10809_1086
72.2
P10809_1113
85.9
Memory CD8 T-cell nTPM: 74.6
Samples: 5
Max nTPM: 82.2
Min nTPM: 62.1
P10809_1012
73.0
P10809_1027
78.4
P10809_1046
82.2
P10809_1065
62.1
P10809_1111
77.1
Naive CD4 T-cell nTPM: 70.3
Samples: 6
Max nTPM: 81.3
Min nTPM: 60.3
P10809_1015
60.3
P10809_1030
70.9
P10809_1049
71.6
P10809_1068
81.3
P10809_1085
71.5
P10809_1112
66.2
Naive CD8 T-cell nTPM: 70.0
Samples: 6
Max nTPM: 79.0
Min nTPM: 57.1
P10809_1016
60.8
P10809_1031
78.9
P10809_1050
79.0
P10809_1069
68.9
P10809_1087
57.1
P10809_1110
75.5
T-reg nTPM: 100.2
Samples: 6
Max nTPM: 127.7
Min nTPM: 81.9
P10809_1018
81.9
P10809_1037
109.2
P10809_1056
127.7
P10809_1075
112.5
P10809_1094
86.0
P10809_1106
84.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
106.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 69.0
Samples: 4
Max nTPM: 85.7
Min nTPM: 44.3
RHH5202_R3573
68.1
RHH5230_R3602
85.7
RHH5259_R3631
44.3
RHH5288_R3660
77.7
Effector memory CD8 T-cell nTPM: 91.6
Samples: 4
Max nTPM: 117.9
Min nTPM: 77.3
RHH5203_R3574
117.9
RHH5231_R3603
85.6
RHH5260_R3632
85.7
RHH5289_R3661
77.3
MAIT T-cell nTPM: 84.7
Samples: 4
Max nTPM: 110.3
Min nTPM: 70.5
RHH5233_R3605
70.5
RHH5205_R3576
78.3
RHH5262_R3634
110.3
RHH5297_R3663
79.6
Memory CD4 T-cell TFH nTPM: 100.6
Samples: 4
Max nTPM: 120.1
Min nTPM: 75.9
RHH5300_R3666
75.9
RHH5236_R3608
96.8
RHH5265_R3637
120.1
RHH5208_R3579
109.7
Memory CD4 T-cell Th1 nTPM: 71.8
Samples: 4
Max nTPM: 81.8
Min nTPM: 54.0
RHH5210_R3581
80.3
RHH5302_R3668
70.9
RHH5238_R3610
54.0
RHH5267_R3639
81.8
Memory CD4 T-cell Th1/Th17 nTPM: 71.0
Samples: 4
Max nTPM: 104.7
Min nTPM: 34.5
RHH5303_R3669
69.5
RHH5211_R3582
104.7
RHH5239_R3611
34.5
RHH5268_R3640
75.2
Memory CD4 T-cell Th17 nTPM: 79.2
Samples: 4
Max nTPM: 88.1
Min nTPM: 60.2
RHH5304_R3670
88.1
RHH5212_R3583
80.3
RHH5240_R3612
60.2
RHH5269_R3641
88.0
Memory CD4 T-cell Th2 nTPM: 95.7
Samples: 4
Max nTPM: 120.2
Min nTPM: 68.6
RHH5305_R3671
75.9
RHH5213_R3584
120.2
RHH5241_R3613
68.6
RHH5270_R3642
118.0
Naive CD4 T-cell nTPM: 73.5
Samples: 4
Max nTPM: 87.5
Min nTPM: 61.5
RHH5306_R3672
77.2
RHH5214_R3585
67.8
RHH5242_R3614
61.5
RHH5271_R3643
87.5
Naive CD8 T-cell nTPM: 58.6
Samples: 4
Max nTPM: 78.9
Min nTPM: 29.7
RHH5201_R3572
51.9
RHH5229_R3601
29.7
RHH5258_R3630
73.9
RHH5287_R3659
78.9
Non-Vd2 gdTCR nTPM: 103.8
Samples: 4
Max nTPM: 139.8
Min nTPM: 79.1
RHH5235_R3607
106.8
RHH5264_R3636
79.1
RHH5207_R3578
139.8
RHH5299_R3665
89.4
T-reg nTPM: 93.6
Samples: 4
Max nTPM: 100.8
Min nTPM: 84.1
RHH5301_R3667
93.8
RHH5237_R3609
84.1
RHH5266_R3638
95.8
RHH5209_R3580
100.8
Terminal effector memory CD4 T-cell nTPM: 106.2
Samples: 2
Max nTPM: 107.9
Min nTPM: 104.5
RHH5243_R3615
104.5
RHH5272_R3644
107.9
Terminal effector memory CD8 T-cell nTPM: 87.6
Samples: 4
Max nTPM: 108.3
Min nTPM: 75.0
RHH5232_R3604
75.0
RHH5204_R3575
108.3
RHH5261_R3633
81.4
RHH5296_R3662
85.5
Vd2 gdTCR nTPM: 79.3
Samples: 4
Max nTPM: 104.3
Min nTPM: 54.2
RHH5234_R3606
54.2
RHH5206_R3577
104.3
RHH5263_R3635
74.6
RHH5298_R3664
84.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
