HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.8 nTPM
HPA Brain:83.1 nTPM
GTEx:18.8 nTPM
FANTOM5:120.3 Scaled Tags Per Million
Pig:86.0 nTPM
Mouse:121.5 nTPM
Allen mouse:21.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.1
Sample id Sample description nTPM
Hippocampus
nTPM: 65.7
1898 Male, age 80, left hemisphere 77.0
2621 Female, age 67, right hemisphere 75.3
1911 Female, age 85, right hemisphere 70.1
2148 Female, age 91, left hemisphere 62.1
2529 Female, age 94, left hemisphere 54.8
1855 Male, age 76, left hemisphere 54.6
Dentate gyrus
nTPM: 71.7
2530 Female, age 94, left hemisphere 93.6
2531 Female, age 67, both hemispheres 75.6
1927 Female, age 91, both hemispheres 73.9
2528 Male, age 74, both hemispheres 68.5
2010 Male, age 76, both hemispheres 64.6
2246 Female, age 85, both hemispheres 53.9
Entorhinal gyrus
nTPM: 79.8
2613 Female, age 94, left hemisphere 101.6
2117 Female, age 91, right hemisphere 96.5
2764 Male, age 80, right hemisphere 81.3
1938 Female, age 85, left hemisphere 72.6
1787 Male, age 76, left hemisphere 65.9
2686 Male, age 75, right hemisphere 60.8
Hippocampus, CA1
nTPM: 71.2
2749 Male, age 80, left hemisphere 126.2
1873 Female, age 85, both hemispheres 71.9
2527 Male, age 74, both hemispheres 63.0
2082 Female, age 91, right hemisphere 50.0
2045 Male, age 76, both hemispheres 44.6
Hippocampus, CA2
nTPM: 71.6
1963 Male, age 80, left hemisphere 94.8
1892 Male, age 76, both hemispheres 84.7
2249 Male, age 74, both hemispheres 72.5
2437 Female, age 94, left hemisphere 71.1
2113 Female, age 91, right hemisphere 59.4
1940 Female, age 85, left hemisphere 47.0
Hippocampus, CA3
nTPM: 74.8
2137 Male, age 80, left hemisphere 95.5
1867 Male, age 76, both hemispheres 87.6
2620 Female, age 94, left hemisphere 85.8
1891 Female, age 85, both hemispheres 85.6
2436 Male, age 74, both hemispheres 50.6
2861 Female, age 67, both hemispheres 43.5
Parahippocampal cortex
nTPM: 68.4
1990 Female, age 91, right hemisphere 107.3
2532 Female, age 72, left hemisphere 88.6
1850 Male, age 80, both hemispheres 88.0
2692 Male, age 74, both hemispheres 81.7
2245 Female, age 91, both hemispheres 70.3
1933 Female, age 85, both hemispheres 61.4
2693 Female, age 94, both hemispheres 60.9
2250 Female, age 67, right hemisphere 46.3
2622 Female, age 67, right hemisphere 40.5
2018 Male, age 76, both hemispheres 38.6
Perirhinal gyrus
nTPM: 66.2
1841 Female, age 85, right hemisphere 68.1
1847 Female, age 91, left hemisphere 67.1
1794 Male, age 80, right hemisphere 66.5
2521 Female, age 94, right hemisphere 65.3
2848 Male, age 76, right hemisphere 64.2
Subiculum
nTPM: 83.1
2438 Female, age 94, left hemisphere 110.3
1901 Male, age 80, both hemispheres 106.9
1977 Female, age 85, both hemispheres 80.1
2042 Male, age 76, both hemispheres 71.1
2619 Male, age 74, both hemispheres 69.6
2729 Female, age 91, right hemisphere 60.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.8
Samples: 197

Max nTPM: 47.2
Min nTPM: 3.4
Std nTPM: 7.9
Median nTPM: 18.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 47.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 45.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 44.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 41.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 40.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 37.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 37.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 35.0
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 34.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 31.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 31.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.3
FF:10169-103B7 60 years, female 124.6
FF:10153-102I9 76 years, female 116.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.0
Pig sample Sample description nTPM
Subiculum
nTPM: 44.4
Samples: 4

Max nTPM: 59.8
Min nTPM: 35.4
Sample A Female 59.8
Sample B Female 37.1
Sample C Male 45.1
Sample D Male 35.4
Dorsal hippocampus
nTPM: 86.0
Samples: 4

Max nTPM: 104.3
Min nTPM: 64.9
Sample A Female 95.5
Sample B Female 79.3
Sample C Male 104.3
Sample D Male 64.9
Entorhinal cortex
nTPM: 69.5
Samples: 4

Max nTPM: 82.6
Min nTPM: 47.1
Sample A Female 67.0
Sample B Female 82.6
Sample C Male 47.1
Sample D Male 81.4
Ventral hippocampus
nTPM: 66.8
Samples: 4

Max nTPM: 87.8
Min nTPM: 42.8
Sample A Female 87.8
Sample B Female 42.8
Sample C Male 67.8
Sample D Male 68.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 121.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.6
Samples: 4

Max nTPM: 91.1
Min nTPM: 71.9
Sample A Male 91.1
Sample B Male 80.7
Sample C Female 71.9
Sample D Female 74.8
Hippocampal formation
nTPM: 121.5
Samples: 4

Max nTPM: 172.1
Min nTPM: 78.8
Sample A Male 78.8
Sample B Male 146.1
Sample C Female 172.1
Sample D Female 89.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.4
70302093 Antisense, RP_050607_03_F01, Mouse strain C57BL/6J (56 days, male) 21.4
71924238 Antisense, RP_050607_03_F01, Mouse strain C57BL/6J (56 days, male) 17.7

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