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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
124.7
nTPM
Monaco:
327.4
nTPM
Schmiedel:
1007.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.7
HPA sample
nTPM
gdT-cell nTPM: 87.8
Samples: 6
Max nTPM: 102.2
Min nTPM: 74.0
P10809_1007
85.5
P10809_1022
102.2
P10809_1041
101.9
P10809_1060
74.8
P10809_1077
74.0
P10809_1098
88.2
MAIT T-cell nTPM: 110.3
Samples: 6
Max nTPM: 122.4
Min nTPM: 95.7
P10809_1006
122.4
P10809_1024
106.9
P10809_1043
115.5
P10809_1062
112.9
P10809_1083
95.7
P10809_1097
108.3
Memory CD4 T-cell nTPM: 79.9
Samples: 6
Max nTPM: 97.7
Min nTPM: 66.6
P10809_1014
81.0
P10809_1026
66.6
P10809_1045
97.7
P10809_1064
67.8
P10809_1086
78.6
P10809_1113
87.9
Memory CD8 T-cell nTPM: 88.2
Samples: 5
Max nTPM: 103.1
Min nTPM: 66.4
P10809_1012
101.2
P10809_1027
87.6
P10809_1046
103.1
P10809_1065
82.5
P10809_1111
66.4
Naive CD4 T-cell nTPM: 75.5
Samples: 6
Max nTPM: 94.3
Min nTPM: 64.8
P10809_1015
65.9
P10809_1030
84.1
P10809_1049
94.3
P10809_1068
72.3
P10809_1085
71.8
P10809_1112
64.8
Naive CD8 T-cell nTPM: 77.6
Samples: 6
Max nTPM: 101.2
Min nTPM: 68.5
P10809_1016
68.7
P10809_1031
101.2
P10809_1050
82.6
P10809_1069
68.5
P10809_1087
74.7
P10809_1110
69.9
T-reg nTPM: 124.7
Samples: 6
Max nTPM: 147.2
Min nTPM: 105.7
P10809_1018
121.2
P10809_1037
119.0
P10809_1056
105.7
P10809_1075
125.0
P10809_1094
147.2
P10809_1106
130.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
327.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 230.0
Samples: 4
Max nTPM: 269.6
Min nTPM: 204.7
RHH5202_R3573
223.2
RHH5230_R3602
269.6
RHH5259_R3631
204.7
RHH5288_R3660
222.5
Effector memory CD8 T-cell nTPM: 269.1
Samples: 4
Max nTPM: 326.3
Min nTPM: 226.7
RHH5203_R3574
248.3
RHH5231_R3603
226.7
RHH5260_R3632
275.1
RHH5289_R3661
326.3
MAIT T-cell nTPM: 327.4
Samples: 4
Max nTPM: 381.6
Min nTPM: 263.4
RHH5233_R3605
364.8
RHH5205_R3576
381.6
RHH5262_R3634
299.7
RHH5297_R3663
263.4
Memory CD4 T-cell TFH nTPM: 225.6
Samples: 4
Max nTPM: 241.2
Min nTPM: 190.6
RHH5300_R3666
190.6
RHH5236_R3608
241.2
RHH5265_R3637
238.9
RHH5208_R3579
231.7
Memory CD4 T-cell Th1 nTPM: 196.3
Samples: 4
Max nTPM: 215.1
Min nTPM: 183.3
RHH5210_R3581
188.4
RHH5302_R3668
198.2
RHH5238_R3610
183.3
RHH5267_R3639
215.1
Memory CD4 T-cell Th1/Th17 nTPM: 223.8
Samples: 4
Max nTPM: 242.8
Min nTPM: 194.3
RHH5303_R3669
237.0
RHH5211_R3582
194.3
RHH5239_R3611
221.1
RHH5268_R3640
242.8
Memory CD4 T-cell Th17 nTPM: 256.1
Samples: 4
Max nTPM: 284.7
Min nTPM: 231.3
RHH5304_R3670
275.3
RHH5212_R3583
231.3
RHH5240_R3612
284.7
RHH5269_R3641
232.9
Memory CD4 T-cell Th2 nTPM: 182.8
Samples: 4
Max nTPM: 218.9
Min nTPM: 159.6
RHH5305_R3671
168.3
RHH5213_R3584
159.6
RHH5241_R3613
184.4
RHH5270_R3642
218.9
Naive CD4 T-cell nTPM: 157.3
Samples: 4
Max nTPM: 175.8
Min nTPM: 138.2
RHH5306_R3672
140.6
RHH5214_R3585
138.2
RHH5242_R3614
175.8
RHH5271_R3643
174.4
Naive CD8 T-cell nTPM: 189.1
Samples: 4
Max nTPM: 207.5
Min nTPM: 146.5
RHH5201_R3572
206.7
RHH5229_R3601
146.5
RHH5258_R3630
195.5
RHH5287_R3659
207.5
Non-Vd2 gdTCR nTPM: 233.3
Samples: 4
Max nTPM: 254.0
Min nTPM: 215.2
RHH5235_R3607
245.8
RHH5264_R3636
215.2
RHH5207_R3578
254.0
RHH5299_R3665
218.2
T-reg nTPM: 239.2
Samples: 4
Max nTPM: 277.1
Min nTPM: 203.6
RHH5301_R3667
203.6
RHH5237_R3609
268.9
RHH5266_R3638
277.1
RHH5209_R3580
207.0
Terminal effector memory CD4 T-cell nTPM: 295.1
Samples: 2
Max nTPM: 314.0
Min nTPM: 276.2
RHH5243_R3615
314.0
RHH5272_R3644
276.2
Terminal effector memory CD8 T-cell nTPM: 252.3
Samples: 4
Max nTPM: 292.9
Min nTPM: 218.4
RHH5232_R3604
269.5
RHH5204_R3575
218.4
RHH5261_R3633
228.4
RHH5296_R3662
292.9
Vd2 gdTCR nTPM: 220.9
Samples: 4
Max nTPM: 239.3
Min nTPM: 199.8
RHH5234_R3606
218.2
RHH5206_R3577
199.8
RHH5263_R3635
239.3
RHH5298_R3664
226.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.