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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
150.4
nTPM
Monaco:
153.0
nTPM
Schmiedel:
21.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
150.4
HPA sample
nTPM
gdT-cell nTPM: 126.8
Samples: 6
Max nTPM: 158.3
Min nTPM: 97.5
P10809_1007
97.5
P10809_1022
130.3
P10809_1041
158.3
P10809_1060
114.5
P10809_1077
130.5
P10809_1098
129.4
MAIT T-cell nTPM: 128.7
Samples: 6
Max nTPM: 165.3
Min nTPM: 90.2
P10809_1006
92.2
P10809_1024
165.3
P10809_1043
137.3
P10809_1062
126.5
P10809_1083
90.2
P10809_1097
160.4
Memory CD4 T-cell nTPM: 131.3
Samples: 6
Max nTPM: 148.3
Min nTPM: 102.6
P10809_1014
102.6
P10809_1026
129.0
P10809_1045
142.3
P10809_1064
124.2
P10809_1086
141.4
P10809_1113
148.3
Memory CD8 T-cell nTPM: 130.1
Samples: 5
Max nTPM: 154.6
Min nTPM: 96.9
P10809_1012
96.9
P10809_1027
129.6
P10809_1046
138.3
P10809_1065
131.0
P10809_1111
154.6
Naive CD4 T-cell nTPM: 143.5
Samples: 6
Max nTPM: 178.5
Min nTPM: 94.6
P10809_1015
94.6
P10809_1030
160.9
P10809_1049
178.5
P10809_1068
143.0
P10809_1085
144.8
P10809_1112
139.2
Naive CD8 T-cell nTPM: 130.6
Samples: 6
Max nTPM: 147.8
Min nTPM: 94.3
P10809_1016
94.3
P10809_1031
134.3
P10809_1050
147.8
P10809_1069
139.7
P10809_1087
146.2
P10809_1110
121.3
T-reg nTPM: 150.4
Samples: 6
Max nTPM: 185.2
Min nTPM: 109.1
P10809_1018
109.1
P10809_1037
149.9
P10809_1056
185.2
P10809_1075
143.1
P10809_1094
142.3
P10809_1106
172.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
153.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 107.3
Samples: 4
Max nTPM: 175.0
Min nTPM: 68.7
RHH5202_R3573
88.7
RHH5230_R3602
68.7
RHH5259_R3631
96.6
RHH5288_R3660
175.0
Effector memory CD8 T-cell nTPM: 110.4
Samples: 4
Max nTPM: 141.3
Min nTPM: 83.4
RHH5203_R3574
111.7
RHH5231_R3603
105.2
RHH5260_R3632
83.4
RHH5289_R3661
141.3
MAIT T-cell nTPM: 117.8
Samples: 4
Max nTPM: 165.0
Min nTPM: 83.0
RHH5233_R3605
134.7
RHH5205_R3576
88.5
RHH5262_R3634
83.0
RHH5297_R3663
165.0
Memory CD4 T-cell TFH nTPM: 127.5
Samples: 4
Max nTPM: 157.3
Min nTPM: 95.5
RHH5300_R3666
157.3
RHH5236_R3608
141.8
RHH5265_R3637
95.5
RHH5208_R3579
115.4
Memory CD4 T-cell Th1 nTPM: 132.0
Samples: 4
Max nTPM: 203.3
Min nTPM: 101.2
RHH5210_R3581
120.3
RHH5302_R3668
203.3
RHH5238_R3610
103.3
RHH5267_R3639
101.2
Memory CD4 T-cell Th1/Th17 nTPM: 126.8
Samples: 4
Max nTPM: 201.8
Min nTPM: 96.8
RHH5303_R3669
201.8
RHH5211_R3582
106.6
RHH5239_R3611
96.8
RHH5268_R3640
101.9
Memory CD4 T-cell Th17 nTPM: 103.2
Samples: 4
Max nTPM: 119.1
Min nTPM: 74.2
RHH5304_R3670
119.1
RHH5212_R3583
103.8
RHH5240_R3612
74.2
RHH5269_R3641
115.6
Memory CD4 T-cell Th2 nTPM: 103.7
Samples: 4
Max nTPM: 123.8
Min nTPM: 87.7
RHH5305_R3671
123.8
RHH5213_R3584
87.7
RHH5241_R3613
115.1
RHH5270_R3642
88.0
Naive CD4 T-cell nTPM: 130.8
Samples: 4
Max nTPM: 154.7
Min nTPM: 113.7
RHH5306_R3672
154.7
RHH5214_R3585
113.7
RHH5242_R3614
134.7
RHH5271_R3643
120.2
Naive CD8 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 131.4
Min nTPM: 69.3
RHH5201_R3572
131.4
RHH5229_R3601
69.3
RHH5258_R3630
116.1
RHH5287_R3659
114.3
Non-Vd2 gdTCR nTPM: 133.3
Samples: 4
Max nTPM: 194.1
Min nTPM: 99.6
RHH5235_R3607
99.6
RHH5264_R3636
139.6
RHH5207_R3578
99.9
RHH5299_R3665
194.1
T-reg nTPM: 121.3
Samples: 4
Max nTPM: 161.9
Min nTPM: 93.1
RHH5301_R3667
161.9
RHH5237_R3609
120.5
RHH5266_R3638
109.7
RHH5209_R3580
93.1
Terminal effector memory CD4 T-cell nTPM: 116.2
Samples: 2
Max nTPM: 121.9
Min nTPM: 110.4
RHH5243_R3615
121.9
RHH5272_R3644
110.4
Terminal effector memory CD8 T-cell nTPM: 153.1
Samples: 4
Max nTPM: 171.1
Min nTPM: 119.4
RHH5232_R3604
153.9
RHH5204_R3575
167.8
RHH5261_R3633
119.4
RHH5296_R3662
171.1
Vd2 gdTCR nTPM: 133.2
Samples: 4
Max nTPM: 189.5
Min nTPM: 92.9
RHH5234_R3606
101.9
RHH5206_R3577
148.4
RHH5263_R3635
92.9
RHH5298_R3664
189.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
