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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
43.3
nTPM
Monaco:
137.6
nTPM
Schmiedel:
105.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.3
HPA sample
nTPM
gdT-cell nTPM: 26.3
Samples: 6
Max nTPM: 33.5
Min nTPM: 20.8
P10809_1007
26.5
P10809_1022
23.7
P10809_1041
20.8
P10809_1060
21.8
P10809_1077
33.5
P10809_1098
31.7
MAIT T-cell nTPM: 30.3
Samples: 6
Max nTPM: 36.7
Min nTPM: 19.7
P10809_1006
33.5
P10809_1024
32.6
P10809_1043
19.7
P10809_1062
26.6
P10809_1083
36.7
P10809_1097
32.5
Memory CD4 T-cell nTPM: 30.6
Samples: 6
Max nTPM: 38.1
Min nTPM: 24.6
P10809_1014
38.1
P10809_1026
26.1
P10809_1045
24.6
P10809_1064
24.7
P10809_1086
35.2
P10809_1113
35.1
Memory CD8 T-cell nTPM: 31.7
Samples: 5
Max nTPM: 35.4
Min nTPM: 24.0
P10809_1012
33.9
P10809_1027
35.4
P10809_1046
24.0
P10809_1065
30.4
P10809_1111
34.9
Naive CD4 T-cell nTPM: 34.6
Samples: 6
Max nTPM: 47.9
Min nTPM: 25.4
P10809_1015
47.9
P10809_1030
25.4
P10809_1049
28.4
P10809_1068
34.8
P10809_1085
34.1
P10809_1112
37.2
Naive CD8 T-cell nTPM: 37.6
Samples: 6
Max nTPM: 46.8
Min nTPM: 30.4
P10809_1016
46.8
P10809_1031
30.4
P10809_1050
33.9
P10809_1069
34.4
P10809_1087
40.5
P10809_1110
39.8
T-reg nTPM: 43.3
Samples: 6
Max nTPM: 49.4
Min nTPM: 36.6
P10809_1018
49.4
P10809_1037
48.3
P10809_1056
39.6
P10809_1075
41.4
P10809_1094
36.6
P10809_1106
44.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 126.2
Samples: 4
Max nTPM: 143.7
Min nTPM: 99.1
RHH5202_R3573
143.7
RHH5230_R3602
135.4
RHH5259_R3631
99.1
RHH5288_R3660
126.7
Effector memory CD8 T-cell nTPM: 125.7
Samples: 4
Max nTPM: 155.4
Min nTPM: 83.8
RHH5203_R3574
155.4
RHH5231_R3603
83.8
RHH5260_R3632
112.3
RHH5289_R3661
151.2
MAIT T-cell nTPM: 115.1
Samples: 4
Max nTPM: 141.6
Min nTPM: 101.5
RHH5233_R3605
113.4
RHH5205_R3576
103.9
RHH5262_R3634
141.6
RHH5297_R3663
101.5
Memory CD4 T-cell TFH nTPM: 136.8
Samples: 4
Max nTPM: 158.2
Min nTPM: 123.2
RHH5300_R3666
123.7
RHH5236_R3608
142.2
RHH5265_R3637
123.2
RHH5208_R3579
158.2
Memory CD4 T-cell Th1 nTPM: 95.4
Samples: 4
Max nTPM: 113.9
Min nTPM: 75.8
RHH5210_R3581
113.9
RHH5302_R3668
98.4
RHH5238_R3610
75.8
RHH5267_R3639
93.4
Memory CD4 T-cell Th1/Th17 nTPM: 121.4
Samples: 4
Max nTPM: 144.0
Min nTPM: 90.4
RHH5303_R3669
144.0
RHH5211_R3582
140.0
RHH5239_R3611
90.4
RHH5268_R3640
111.2
Memory CD4 T-cell Th17 nTPM: 115.0
Samples: 4
Max nTPM: 121.1
Min nTPM: 107.6
RHH5304_R3670
117.8
RHH5212_R3583
107.6
RHH5240_R3612
121.1
RHH5269_R3641
113.4
Memory CD4 T-cell Th2 nTPM: 137.6
Samples: 4
Max nTPM: 161.0
Min nTPM: 110.4
RHH5305_R3671
161.0
RHH5213_R3584
135.0
RHH5241_R3613
143.9
RHH5270_R3642
110.4
Naive CD4 T-cell nTPM: 124.8
Samples: 4
Max nTPM: 140.4
Min nTPM: 108.8
RHH5306_R3672
108.8
RHH5214_R3585
118.1
RHH5242_R3614
131.7
RHH5271_R3643
140.4
Naive CD8 T-cell nTPM: 122.2
Samples: 4
Max nTPM: 182.9
Min nTPM: 87.2
RHH5201_R3572
182.9
RHH5229_R3601
87.2
RHH5258_R3630
114.2
RHH5287_R3659
104.4
Non-Vd2 gdTCR nTPM: 113.7
Samples: 4
Max nTPM: 134.9
Min nTPM: 96.5
RHH5235_R3607
101.1
RHH5264_R3636
134.9
RHH5207_R3578
122.1
RHH5299_R3665
96.5
T-reg nTPM: 111.0
Samples: 4
Max nTPM: 124.3
Min nTPM: 96.2
RHH5301_R3667
100.8
RHH5237_R3609
124.3
RHH5266_R3638
122.8
RHH5209_R3580
96.2
Terminal effector memory CD4 T-cell nTPM: 101.8
Samples: 2
Max nTPM: 120.9
Min nTPM: 82.6
RHH5243_R3615
82.6
RHH5272_R3644
120.9
Terminal effector memory CD8 T-cell nTPM: 120.2
Samples: 4
Max nTPM: 136.7
Min nTPM: 103.0
RHH5232_R3604
136.7
RHH5204_R3575
125.8
RHH5261_R3633
103.0
RHH5296_R3662
115.4
Vd2 gdTCR nTPM: 114.0
Samples: 4
Max nTPM: 139.3
Min nTPM: 100.5
RHH5234_R3606
100.5
RHH5206_R3577
112.3
RHH5263_R3635
139.3
RHH5298_R3664
103.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
