HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:20.3 nTPM
HPA Brain:191.9 nTPM
GTEx:20.3 nTPM
FANTOM5:210.6 Scaled Tags Per Million
Pig:124.1 nTPM
Mouse:173.2 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002455
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 191.9
Sample id Sample description nTPM
Hippocampus
nTPM: 113.4
1898 Male, age 80, left hemisphere 187.1
1855 Male, age 76, left hemisphere 121.9
2621 Female, age 67, right hemisphere 108.6
1911 Female, age 85, right hemisphere 92.9
2148 Female, age 91, left hemisphere 89.2
2529 Female, age 94, left hemisphere 80.7
Dentate gyrus
nTPM: 115.4
1927 Female, age 91, both hemispheres 140.2
2010 Male, age 76, both hemispheres 133.3
2246 Female, age 85, both hemispheres 117.7
2531 Female, age 67, both hemispheres 112.6
2528 Male, age 74, both hemispheres 99.1
2530 Female, age 94, left hemisphere 89.6
Entorhinal gyrus
nTPM: 124.5
2764 Male, age 80, right hemisphere 170.5
1938 Female, age 85, left hemisphere 148.0
2613 Female, age 94, left hemisphere 118.6
1787 Male, age 76, left hemisphere 106.9
2686 Male, age 75, right hemisphere 103.1
2117 Female, age 91, right hemisphere 99.9
Hippocampus, CA1
nTPM: 145.2
2749 Male, age 80, left hemisphere 231.4
1873 Female, age 85, both hemispheres 135.4
2045 Male, age 76, both hemispheres 129.8
2082 Female, age 91, right hemisphere 125.9
2527 Male, age 74, both hemispheres 103.2
Hippocampus, CA2
nTPM: 120.1
1963 Male, age 80, left hemisphere 168.1
1892 Male, age 76, both hemispheres 154.6
2113 Female, age 91, right hemisphere 112.8
1940 Female, age 85, left hemisphere 103.3
2249 Male, age 74, both hemispheres 94.6
2437 Female, age 94, left hemisphere 87.3
Hippocampus, CA3
nTPM: 127.5
2137 Male, age 80, left hemisphere 221.3
2620 Female, age 94, left hemisphere 131.4
1867 Male, age 76, both hemispheres 112.3
2861 Female, age 67, both hemispheres 105.2
1891 Female, age 85, both hemispheres 101.1
2436 Male, age 74, both hemispheres 93.6
Parahippocampal cortex
nTPM: 128.6
1850 Male, age 80, both hemispheres 201.1
2693 Female, age 94, both hemispheres 167.8
1933 Female, age 85, both hemispheres 141.5
2245 Female, age 91, both hemispheres 139.7
2250 Female, age 67, right hemisphere 121.7
1990 Female, age 91, right hemisphere 113.8
2532 Female, age 72, left hemisphere 110.0
2018 Male, age 76, both hemispheres 108.9
2622 Female, age 67, right hemisphere 95.9
2692 Male, age 74, both hemispheres 85.3
Perirhinal gyrus
nTPM: 191.9
1794 Male, age 80, right hemisphere 233.9
2521 Female, age 94, right hemisphere 196.4
1847 Female, age 91, left hemisphere 182.3
2848 Male, age 76, right hemisphere 176.5
1841 Female, age 85, right hemisphere 170.3
Subiculum
nTPM: 102.2
1901 Male, age 80, both hemispheres 139.6
1977 Female, age 85, both hemispheres 128.6
2729 Female, age 91, right hemisphere 97.5
2042 Male, age 76, both hemispheres 92.5
2619 Male, age 74, both hemispheres 78.9
2438 Female, age 94, left hemisphere 76.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.3
Samples: 197

Max nTPM: 59.0
Min nTPM: 5.3
Std nTPM: 9.7
Median nTPM: 19.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 59.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 58.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 49.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 45.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 39.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 39.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 39.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 39.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 38.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 210.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 210.6
FF:10169-103B7 60 years, female 297.0
FF:10153-102I9 76 years, female 124.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 124.1
Pig sample Sample description nTPM
Subiculum
nTPM: 106.4
Samples: 4

Max nTPM: 135.6
Min nTPM: 83.3
Sample A Female 135.6
Sample B Female 99.2
Sample C Male 107.5
Sample D Male 83.3
Dorsal hippocampus
nTPM: 118.6
Samples: 4

Max nTPM: 138.5
Min nTPM: 100.3
Sample A Female 132.0
Sample B Female 138.5
Sample C Male 100.3
Sample D Male 103.5
Entorhinal cortex
nTPM: 113.2
Samples: 4

Max nTPM: 134.4
Min nTPM: 100.4
Sample A Female 110.1
Sample B Female 107.7
Sample C Male 134.4
Sample D Male 100.4
Ventral hippocampus
nTPM: 124.1
Samples: 4

Max nTPM: 150.0
Min nTPM: 99.2
Sample A Female 115.9
Sample B Female 99.2
Sample C Male 131.4
Sample D Male 150.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 173.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 173.2
Samples: 4

Max nTPM: 190.8
Min nTPM: 161.3
Sample A Male 170.6
Sample B Male 170.1
Sample C Female 161.3
Sample D Female 190.8
Hippocampal formation
nTPM: 130.9
Samples: 4

Max nTPM: 144.1
Min nTPM: 119.3
Sample A Male 144.1
Sample B Male 132.0
Sample C Female 128.3
Sample D Female 119.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
69095967 Antisense, RP_050324_02_F04, Mouse strain C57BL/6J (56 days, male) 14.3
71152515 Antisense, RP_050719_04_B07, Mouse strain C57BL/6J (56 days, male) 7.9
73636030 Antisense, RP_050816_03_A05, Mouse strain C57BL/6J (56 days, male) 6.9
71212211 Antisense, RP_050816_03_A05, Mouse strain C57BL/6J (56 days, male) 4.1
71580198 Antisense, RP_050915_04_D08, Mouse strain C57BL/6J (56 days, male) 0.0

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