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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
130.7
nTPM
Monaco:
66.2
nTPM
Schmiedel:
236.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.7
HPA sample
nTPM
gdT-cell nTPM: 55.1
Samples: 6
Max nTPM: 89.9
Min nTPM: 35.6
P10809_1007
48.2
P10809_1022
35.6
P10809_1041
55.6
P10809_1060
47.1
P10809_1077
89.9
P10809_1098
54.2
MAIT T-cell nTPM: 43.5
Samples: 6
Max nTPM: 59.6
Min nTPM: 33.6
P10809_1006
35.6
P10809_1024
52.2
P10809_1043
46.3
P10809_1062
33.6
P10809_1083
59.6
P10809_1097
33.8
Memory CD4 T-cell nTPM: 59.9
Samples: 6
Max nTPM: 77.5
Min nTPM: 41.7
P10809_1014
41.7
P10809_1026
67.9
P10809_1045
55.3
P10809_1064
77.5
P10809_1086
67.0
P10809_1113
50.1
Memory CD8 T-cell nTPM: 74.2
Samples: 5
Max nTPM: 95.3
Min nTPM: 51.8
P10809_1012
51.8
P10809_1027
85.1
P10809_1046
95.3
P10809_1065
81.3
P10809_1111
57.3
Naive CD4 T-cell nTPM: 23.1
Samples: 6
Max nTPM: 44.7
Min nTPM: 15.7
P10809_1015
18.4
P10809_1030
20.4
P10809_1049
21.5
P10809_1068
18.0
P10809_1085
44.7
P10809_1112
15.7
Naive CD8 T-cell nTPM: 50.6
Samples: 6
Max nTPM: 82.1
Min nTPM: 20.3
P10809_1016
20.9
P10809_1031
55.4
P10809_1050
46.4
P10809_1069
78.3
P10809_1087
82.1
P10809_1110
20.3
T-reg nTPM: 130.7
Samples: 6
Max nTPM: 158.7
Min nTPM: 102.7
P10809_1018
102.7
P10809_1037
111.4
P10809_1056
158.7
P10809_1075
136.5
P10809_1094
131.3
P10809_1106
143.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 25.8
Samples: 4
Max nTPM: 46.5
Min nTPM: 14.5
RHH5202_R3573
18.6
RHH5230_R3602
14.5
RHH5259_R3631
23.6
RHH5288_R3660
46.5
Effector memory CD8 T-cell nTPM: 40.5
Samples: 4
Max nTPM: 54.7
Min nTPM: 30.3
RHH5203_R3574
39.6
RHH5231_R3603
54.7
RHH5260_R3632
37.5
RHH5289_R3661
30.3
MAIT T-cell nTPM: 27.3
Samples: 4
Max nTPM: 44.9
Min nTPM: 15.9
RHH5233_R3605
29.9
RHH5205_R3576
18.4
RHH5262_R3634
15.9
RHH5297_R3663
44.9
Memory CD4 T-cell TFH nTPM: 36.2
Samples: 4
Max nTPM: 52.8
Min nTPM: 24.0
RHH5300_R3666
42.4
RHH5236_R3608
52.8
RHH5265_R3637
25.6
RHH5208_R3579
24.0
Memory CD4 T-cell Th1 nTPM: 31.7
Samples: 4
Max nTPM: 56.2
Min nTPM: 14.4
RHH5210_R3581
14.4
RHH5302_R3668
56.2
RHH5238_R3610
29.4
RHH5267_R3639
26.6
Memory CD4 T-cell Th1/Th17 nTPM: 34.1
Samples: 4
Max nTPM: 64.6
Min nTPM: 12.2
RHH5303_R3669
64.6
RHH5211_R3582
33.0
RHH5239_R3611
12.2
RHH5268_R3640
26.7
Memory CD4 T-cell Th17 nTPM: 28.5
Samples: 4
Max nTPM: 45.7
Min nTPM: 13.8
RHH5304_R3670
28.3
RHH5212_R3583
45.7
RHH5240_R3612
13.8
RHH5269_R3641
26.1
Memory CD4 T-cell Th2 nTPM: 24.3
Samples: 4
Max nTPM: 33.0
Min nTPM: 17.9
RHH5305_R3671
33.0
RHH5213_R3584
23.4
RHH5241_R3613
22.9
RHH5270_R3642
17.9
Naive CD4 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 18.8
Min nTPM: 10.5
RHH5306_R3672
14.5
RHH5214_R3585
18.8
RHH5242_R3614
13.2
RHH5271_R3643
10.5
Naive CD8 T-cell nTPM: 8.2
Samples: 4
Max nTPM: 12.5
Min nTPM: 5.4
RHH5201_R3572
7.6
RHH5229_R3601
5.4
RHH5258_R3630
12.5
RHH5287_R3659
7.1
Non-Vd2 gdTCR nTPM: 49.3
Samples: 4
Max nTPM: 82.4
Min nTPM: 25.0
RHH5235_R3607
25.0
RHH5264_R3636
54.4
RHH5207_R3578
35.5
RHH5299_R3665
82.4
T-reg nTPM: 43.3
Samples: 4
Max nTPM: 68.8
Min nTPM: 28.6
RHH5301_R3667
68.8
RHH5237_R3609
47.0
RHH5266_R3638
28.6
RHH5209_R3580
28.7
Terminal effector memory CD4 T-cell nTPM: 58.9
Samples: 2
Max nTPM: 72.7
Min nTPM: 45.0
RHH5243_R3615
45.0
RHH5272_R3644
72.7
Terminal effector memory CD8 T-cell nTPM: 66.2
Samples: 4
Max nTPM: 104.9
Min nTPM: 39.0
RHH5232_R3604
39.0
RHH5204_R3575
80.7
RHH5261_R3633
40.0
RHH5296_R3662
104.9
Vd2 gdTCR nTPM: 22.2
Samples: 4
Max nTPM: 29.9
Min nTPM: 13.2
RHH5234_R3606
13.2
RHH5206_R3577
26.5
RHH5263_R3635
19.0
RHH5298_R3664
29.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
