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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
93.0
nTPM
Monaco:
341.2
nTPM
Schmiedel:
613.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.0
HPA sample
nTPM
gdT-cell nTPM: 57.0
Samples: 6
Max nTPM: 75.7
Min nTPM: 47.9
P10809_1007
55.4
P10809_1022
75.7
P10809_1041
47.9
P10809_1060
51.4
P10809_1077
54.5
P10809_1098
56.9
MAIT T-cell nTPM: 79.7
Samples: 6
Max nTPM: 100.2
Min nTPM: 63.8
P10809_1006
92.9
P10809_1024
100.2
P10809_1043
64.0
P10809_1062
78.5
P10809_1083
78.8
P10809_1097
63.8
Memory CD4 T-cell nTPM: 76.5
Samples: 6
Max nTPM: 86.1
Min nTPM: 64.9
P10809_1014
86.1
P10809_1026
77.0
P10809_1045
84.0
P10809_1064
64.9
P10809_1086
69.4
P10809_1113
77.5
Memory CD8 T-cell nTPM: 73.4
Samples: 5
Max nTPM: 84.1
Min nTPM: 56.5
P10809_1012
80.3
P10809_1027
83.0
P10809_1046
63.1
P10809_1065
56.5
P10809_1111
84.1
Naive CD4 T-cell nTPM: 85.7
Samples: 6
Max nTPM: 99.0
Min nTPM: 70.4
P10809_1015
99.0
P10809_1030
99.0
P10809_1049
89.0
P10809_1068
70.4
P10809_1085
82.0
P10809_1112
74.9
Naive CD8 T-cell nTPM: 82.4
Samples: 6
Max nTPM: 107.7
Min nTPM: 65.6
P10809_1016
93.3
P10809_1031
107.7
P10809_1050
65.6
P10809_1069
66.5
P10809_1087
70.1
P10809_1110
90.9
T-reg nTPM: 93.0
Samples: 6
Max nTPM: 115.0
Min nTPM: 57.5
P10809_1018
105.4
P10809_1037
115.0
P10809_1056
57.5
P10809_1075
82.2
P10809_1094
104.8
P10809_1106
93.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
341.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 272.6
Samples: 4
Max nTPM: 341.8
Min nTPM: 217.7
RHH5202_R3573
274.2
RHH5230_R3602
341.8
RHH5259_R3631
256.8
RHH5288_R3660
217.7
Effector memory CD8 T-cell nTPM: 321.2
Samples: 4
Max nTPM: 358.9
Min nTPM: 255.7
RHH5203_R3574
337.5
RHH5231_R3603
358.9
RHH5260_R3632
255.7
RHH5289_R3661
332.5
MAIT T-cell nTPM: 260.6
Samples: 4
Max nTPM: 283.2
Min nTPM: 208.0
RHH5233_R3605
281.0
RHH5205_R3576
283.2
RHH5262_R3634
270.0
RHH5297_R3663
208.0
Memory CD4 T-cell TFH nTPM: 278.7
Samples: 4
Max nTPM: 328.2
Min nTPM: 233.5
RHH5300_R3666
233.5
RHH5236_R3608
328.2
RHH5265_R3637
310.4
RHH5208_R3579
242.6
Memory CD4 T-cell Th1 nTPM: 276.6
Samples: 4
Max nTPM: 329.7
Min nTPM: 223.0
RHH5210_R3581
289.9
RHH5302_R3668
263.9
RHH5238_R3610
223.0
RHH5267_R3639
329.7
Memory CD4 T-cell Th1/Th17 nTPM: 284.3
Samples: 4
Max nTPM: 328.5
Min nTPM: 229.5
RHH5303_R3669
296.0
RHH5211_R3582
283.1
RHH5239_R3611
229.5
RHH5268_R3640
328.5
Memory CD4 T-cell Th17 nTPM: 324.5
Samples: 4
Max nTPM: 398.4
Min nTPM: 254.6
RHH5304_R3670
297.4
RHH5212_R3583
254.6
RHH5240_R3612
398.4
RHH5269_R3641
347.7
Memory CD4 T-cell Th2 nTPM: 299.0
Samples: 4
Max nTPM: 348.6
Min nTPM: 256.0
RHH5305_R3671
256.0
RHH5213_R3584
263.3
RHH5241_R3613
348.6
RHH5270_R3642
328.0
Naive CD4 T-cell nTPM: 335.5
Samples: 4
Max nTPM: 432.0
Min nTPM: 285.7
RHH5306_R3672
285.7
RHH5214_R3585
305.2
RHH5242_R3614
319.2
RHH5271_R3643
432.0
Naive CD8 T-cell nTPM: 341.2
Samples: 4
Max nTPM: 384.8
Min nTPM: 299.1
RHH5201_R3572
384.8
RHH5229_R3601
299.1
RHH5258_R3630
355.0
RHH5287_R3659
326.0
Non-Vd2 gdTCR nTPM: 238.8
Samples: 4
Max nTPM: 296.0
Min nTPM: 173.6
RHH5235_R3607
233.1
RHH5264_R3636
296.0
RHH5207_R3578
252.4
RHH5299_R3665
173.6
T-reg nTPM: 303.3
Samples: 4
Max nTPM: 396.1
Min nTPM: 225.5
RHH5301_R3667
225.5
RHH5237_R3609
396.1
RHH5266_R3638
333.8
RHH5209_R3580
257.6
Terminal effector memory CD4 T-cell nTPM: 273.7
Samples: 2
Max nTPM: 279.6
Min nTPM: 267.8
RHH5243_R3615
279.6
RHH5272_R3644
267.8
Terminal effector memory CD8 T-cell nTPM: 241.3
Samples: 4
Max nTPM: 279.4
Min nTPM: 205.7
RHH5232_R3604
279.4
RHH5204_R3575
205.7
RHH5261_R3633
256.7
RHH5296_R3662
223.2
Vd2 gdTCR nTPM: 271.9
Samples: 4
Max nTPM: 401.2
Min nTPM: 172.1
RHH5234_R3606
258.2
RHH5206_R3577
256.2
RHH5263_R3635
401.2
RHH5298_R3664
172.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
