HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:23.9 nTPM
HPA Brain:59.8 nTPM
GTEx:23.9 nTPM
FANTOM5:10.0 Scaled Tags Per Million
Pig:3.7 nTPM
Mouse:5.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055985
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.8
Sample id Sample description nTPM
Hippocampus
nTPM: 58.7
2529 Female, age 94, left hemisphere 70.3
2148 Female, age 91, left hemisphere 65.1
1898 Male, age 80, left hemisphere 62.8
2621 Female, age 67, right hemisphere 60.9
1911 Female, age 85, right hemisphere 52.5
1855 Male, age 76, left hemisphere 41.0
Dentate gyrus
nTPM: 58.4
2530 Female, age 94, left hemisphere 75.2
2528 Male, age 74, both hemispheres 63.8
2010 Male, age 76, both hemispheres 63.0
2531 Female, age 67, both hemispheres 54.6
1927 Female, age 91, both hemispheres 52.5
2246 Female, age 85, both hemispheres 41.3
Entorhinal gyrus
nTPM: 54.5
2117 Female, age 91, right hemisphere 61.9
2764 Male, age 80, right hemisphere 58.4
2686 Male, age 75, right hemisphere 54.8
1787 Male, age 76, left hemisphere 53.1
2613 Female, age 94, left hemisphere 50.8
1938 Female, age 85, left hemisphere 47.8
Hippocampus, CA1
nTPM: 47.9
2527 Male, age 74, both hemispheres 62.5
2749 Male, age 80, left hemisphere 60.2
1873 Female, age 85, both hemispheres 45.2
2045 Male, age 76, both hemispheres 38.2
2082 Female, age 91, right hemisphere 33.3
Hippocampus, CA2
nTPM: 59.8
1963 Male, age 80, left hemisphere 100.3
2437 Female, age 94, left hemisphere 61.0
2249 Male, age 74, both hemispheres 60.6
1940 Female, age 85, left hemisphere 56.5
2113 Female, age 91, right hemisphere 42.0
1892 Male, age 76, both hemispheres 38.4
Hippocampus, CA3
nTPM: 53.0
2861 Female, age 67, both hemispheres 77.9
2436 Male, age 74, both hemispheres 57.3
2620 Female, age 94, left hemisphere 55.0
1891 Female, age 85, both hemispheres 43.5
2137 Male, age 80, left hemisphere 42.1
1867 Male, age 76, both hemispheres 41.9
Parahippocampal cortex
nTPM: 49.7
2622 Female, age 67, right hemisphere 72.7
2250 Female, age 67, right hemisphere 55.6
1990 Female, age 91, right hemisphere 55.4
2245 Female, age 91, both hemispheres 53.0
2018 Male, age 76, both hemispheres 52.1
2692 Male, age 74, both hemispheres 50.9
1933 Female, age 85, both hemispheres 46.4
2693 Female, age 94, both hemispheres 38.2
1850 Male, age 80, both hemispheres 36.7
2532 Female, age 72, left hemisphere 36.7
Perirhinal gyrus
nTPM: 40.2
2521 Female, age 94, right hemisphere 50.2
1794 Male, age 80, right hemisphere 48.0
1847 Female, age 91, left hemisphere 39.8
1841 Female, age 85, right hemisphere 34.4
2848 Male, age 76, right hemisphere 28.5
Subiculum
nTPM: 50.7
2619 Male, age 74, both hemispheres 65.6
2729 Female, age 91, right hemisphere 62.1
1977 Female, age 85, both hemispheres 52.8
2042 Male, age 76, both hemispheres 46.2
1901 Male, age 80, both hemispheres 45.9
2438 Female, age 94, left hemisphere 31.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.9
Samples: 197

Max nTPM: 74.4
Min nTPM: 5.5
Std nTPM: 11.8
Median nTPM: 21.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 74.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 69.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 65.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 60.4
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 57.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 54.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 52.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 49.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 48.2
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 47.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 45.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.0
FF:10153-102I9 76 years, female 12.7
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.7
Pig sample Sample description nTPM
Subiculum
nTPM: 3.3
Samples: 4

Max nTPM: 3.6
Min nTPM: 3.1
Sample A Female 3.6
Sample B Female 3.1
Sample C Male 3.5
Sample D Male 3.1
Dorsal hippocampus
nTPM: 2.7
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 2.4
Sample C Male 3.4
Sample D Male 2.5
Entorhinal cortex
nTPM: 3.7
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.0
Sample A Female 3.0
Sample B Female 4.4
Sample C Male 3.8
Sample D Male 3.7
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.6
Sample A Female 3.1
Sample B Female 3.0
Sample C Male 4.2
Sample D Male 2.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.7
Sample A Male 6.6
Sample B Male 7.1
Sample C Female 4.7
Sample D Female 5.1
Hippocampal formation
nTPM: 5.2
Samples: 4

Max nTPM: 6.4
Min nTPM: 3.9
Sample A Male 3.9
Sample B Male 6.4
Sample C Female 4.5
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
70445586 Antisense, RP_050614_04_B06, Mouse strain C57BL/6J (56 days, male) 1.0

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