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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
296.2
nTPM
Monaco:
69.4
nTPM
Schmiedel:
63.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
296.2
HPA sample
nTPM
gdT-cell nTPM: 205.3
Samples: 6
Max nTPM: 257.6
Min nTPM: 151.4
P10809_1007
151.4
P10809_1022
171.7
P10809_1041
215.3
P10809_1060
184.2
P10809_1077
257.6
P10809_1098
251.4
MAIT T-cell nTPM: 233.4
Samples: 6
Max nTPM: 356.0
Min nTPM: 121.8
P10809_1006
121.8
P10809_1024
260.3
P10809_1043
205.1
P10809_1062
222.7
P10809_1083
234.2
P10809_1097
356.0
Memory CD4 T-cell nTPM: 261.9
Samples: 6
Max nTPM: 314.8
Min nTPM: 175.8
P10809_1014
175.8
P10809_1026
311.4
P10809_1045
224.4
P10809_1064
233.3
P10809_1086
311.6
P10809_1113
314.8
Memory CD8 T-cell nTPM: 234.0
Samples: 5
Max nTPM: 305.0
Min nTPM: 140.4
P10809_1012
140.4
P10809_1027
267.0
P10809_1046
222.1
P10809_1065
235.7
P10809_1111
305.0
Naive CD4 T-cell nTPM: 296.2
Samples: 6
Max nTPM: 352.1
Min nTPM: 198.6
P10809_1015
198.6
P10809_1030
352.1
P10809_1049
332.3
P10809_1068
269.4
P10809_1085
293.5
P10809_1112
331.4
Naive CD8 T-cell nTPM: 260.8
Samples: 6
Max nTPM: 307.8
Min nTPM: 206.2
P10809_1016
206.2
P10809_1031
257.6
P10809_1050
246.2
P10809_1069
243.9
P10809_1087
307.8
P10809_1110
302.9
T-reg nTPM: 283.0
Samples: 6
Max nTPM: 361.5
Min nTPM: 164.1
P10809_1018
164.1
P10809_1037
347.4
P10809_1056
253.9
P10809_1075
287.4
P10809_1094
283.6
P10809_1106
361.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 53.2
Samples: 4
Max nTPM: 86.3
Min nTPM: 35.0
RHH5202_R3573
35.0
RHH5230_R3602
40.3
RHH5259_R3631
86.3
RHH5288_R3660
51.0
Effector memory CD8 T-cell nTPM: 39.9
Samples: 4
Max nTPM: 53.1
Min nTPM: 26.5
RHH5203_R3574
45.7
RHH5231_R3603
34.2
RHH5260_R3632
53.1
RHH5289_R3661
26.5
MAIT T-cell nTPM: 40.8
Samples: 4
Max nTPM: 52.6
Min nTPM: 34.0
RHH5233_R3605
39.2
RHH5205_R3576
34.0
RHH5262_R3634
52.6
RHH5297_R3663
37.3
Memory CD4 T-cell TFH nTPM: 46.3
Samples: 4
Max nTPM: 65.3
Min nTPM: 37.8
RHH5300_R3666
40.2
RHH5236_R3608
65.3
RHH5265_R3637
37.8
RHH5208_R3579
42.0
Memory CD4 T-cell Th1 nTPM: 58.8
Samples: 4
Max nTPM: 71.6
Min nTPM: 39.6
RHH5210_R3581
39.6
RHH5302_R3668
71.6
RHH5238_R3610
63.9
RHH5267_R3639
60.0
Memory CD4 T-cell Th1/Th17 nTPM: 61.9
Samples: 4
Max nTPM: 75.8
Min nTPM: 54.6
RHH5303_R3669
60.5
RHH5211_R3582
54.6
RHH5239_R3611
56.6
RHH5268_R3640
75.8
Memory CD4 T-cell Th17 nTPM: 54.6
Samples: 4
Max nTPM: 64.1
Min nTPM: 27.7
RHH5304_R3670
62.8
RHH5212_R3583
27.7
RHH5240_R3612
63.8
RHH5269_R3641
64.1
Memory CD4 T-cell Th2 nTPM: 52.8
Samples: 4
Max nTPM: 75.6
Min nTPM: 38.0
RHH5305_R3671
75.6
RHH5213_R3584
51.5
RHH5241_R3613
46.0
RHH5270_R3642
38.0
Naive CD4 T-cell nTPM: 69.4
Samples: 4
Max nTPM: 112.2
Min nTPM: 35.3
RHH5306_R3672
68.4
RHH5214_R3585
112.2
RHH5242_R3614
35.3
RHH5271_R3643
61.7
Naive CD8 T-cell nTPM: 59.3
Samples: 4
Max nTPM: 75.5
Min nTPM: 40.0
RHH5201_R3572
49.9
RHH5229_R3601
75.5
RHH5258_R3630
40.0
RHH5287_R3659
71.8
Non-Vd2 gdTCR nTPM: 51.1
Samples: 4
Max nTPM: 55.5
Min nTPM: 42.4
RHH5235_R3607
55.5
RHH5264_R3636
53.4
RHH5207_R3578
53.1
RHH5299_R3665
42.4
T-reg nTPM: 52.2
Samples: 4
Max nTPM: 56.6
Min nTPM: 47.4
RHH5301_R3667
56.6
RHH5237_R3609
47.4
RHH5266_R3638
48.6
RHH5209_R3580
56.3
Terminal effector memory CD4 T-cell nTPM: 49.8
Samples: 2
Max nTPM: 53.3
Min nTPM: 46.2
RHH5243_R3615
46.2
RHH5272_R3644
53.3
Terminal effector memory CD8 T-cell nTPM: 56.2
Samples: 4
Max nTPM: 76.0
Min nTPM: 30.6
RHH5232_R3604
30.6
RHH5204_R3575
72.4
RHH5261_R3633
76.0
RHH5296_R3662
45.8
Vd2 gdTCR nTPM: 69.4
Samples: 4
Max nTPM: 97.8
Min nTPM: 42.5
RHH5234_R3606
42.5
RHH5206_R3577
97.8
RHH5263_R3635
65.7
RHH5298_R3664
71.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
