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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
242.1
nTPM
Monaco:
76.6
nTPM
Schmiedel:
92.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
242.1
HPA sample
nTPM
gdT-cell nTPM: 123.4
Samples: 6
Max nTPM: 169.2
Min nTPM: 73.5
P10809_1007
131.0
P10809_1022
73.5
P10809_1041
116.4
P10809_1060
128.4
P10809_1077
169.2
P10809_1098
121.7
MAIT T-cell nTPM: 152.6
Samples: 6
Max nTPM: 187.4
Min nTPM: 126.2
P10809_1006
126.2
P10809_1024
148.7
P10809_1043
140.3
P10809_1062
187.4
P10809_1083
179.8
P10809_1097
132.9
Memory CD4 T-cell nTPM: 194.8
Samples: 6
Max nTPM: 271.2
Min nTPM: 128.1
P10809_1014
207.6
P10809_1026
161.9
P10809_1045
128.1
P10809_1064
271.2
P10809_1086
231.9
P10809_1113
168.1
Memory CD8 T-cell nTPM: 156.3
Samples: 5
Max nTPM: 225.8
Min nTPM: 123.0
P10809_1012
135.8
P10809_1027
165.9
P10809_1046
123.0
P10809_1065
225.8
P10809_1111
130.8
Naive CD4 T-cell nTPM: 236.1
Samples: 6
Max nTPM: 299.3
Min nTPM: 183.3
P10809_1015
278.0
P10809_1030
230.1
P10809_1049
183.3
P10809_1068
299.3
P10809_1085
241.8
P10809_1112
184.3
Naive CD8 T-cell nTPM: 225.1
Samples: 6
Max nTPM: 314.6
Min nTPM: 174.7
P10809_1016
314.6
P10809_1031
224.7
P10809_1050
184.0
P10809_1069
248.3
P10809_1087
204.3
P10809_1110
174.7
T-reg nTPM: 242.2
Samples: 6
Max nTPM: 300.7
Min nTPM: 211.2
P10809_1018
226.3
P10809_1037
266.6
P10809_1056
229.6
P10809_1075
300.7
P10809_1094
211.2
P10809_1106
218.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 50.3
Samples: 4
Max nTPM: 86.4
Min nTPM: 16.3
RHH5202_R3573
16.3
RHH5230_R3602
52.9
RHH5259_R3631
86.4
RHH5288_R3660
45.7
Effector memory CD8 T-cell nTPM: 35.8
Samples: 4
Max nTPM: 68.8
Min nTPM: 19.3
RHH5203_R3574
26.9
RHH5231_R3603
28.3
RHH5260_R3632
68.8
RHH5289_R3661
19.3
MAIT T-cell nTPM: 38.1
Samples: 4
Max nTPM: 57.3
Min nTPM: 18.4
RHH5233_R3605
18.4
RHH5205_R3576
57.3
RHH5262_R3634
49.9
RHH5297_R3663
26.8
Memory CD4 T-cell TFH nTPM: 33.9
Samples: 4
Max nTPM: 45.9
Min nTPM: 22.9
RHH5300_R3666
33.6
RHH5236_R3608
45.9
RHH5265_R3637
33.1
RHH5208_R3579
22.9
Memory CD4 T-cell Th1 nTPM: 62.5
Samples: 4
Max nTPM: 102.7
Min nTPM: 25.0
RHH5210_R3581
25.0
RHH5302_R3668
59.8
RHH5238_R3610
102.7
RHH5267_R3639
62.5
Memory CD4 T-cell Th1/Th17 nTPM: 51.5
Samples: 4
Max nTPM: 78.6
Min nTPM: 21.8
RHH5303_R3669
21.8
RHH5211_R3582
38.8
RHH5239_R3611
66.8
RHH5268_R3640
78.6
Memory CD4 T-cell Th17 nTPM: 51.0
Samples: 4
Max nTPM: 87.6
Min nTPM: 18.1
RHH5304_R3670
87.6
RHH5212_R3583
18.1
RHH5240_R3612
54.9
RHH5269_R3641
43.3
Memory CD4 T-cell Th2 nTPM: 52.1
Samples: 4
Max nTPM: 85.9
Min nTPM: 32.6
RHH5305_R3671
85.9
RHH5213_R3584
44.8
RHH5241_R3613
32.6
RHH5270_R3642
45.0
Naive CD4 T-cell nTPM: 76.6
Samples: 4
Max nTPM: 108.6
Min nTPM: 48.6
RHH5306_R3672
83.8
RHH5214_R3585
108.6
RHH5242_R3614
48.6
RHH5271_R3643
65.5
Naive CD8 T-cell nTPM: 72.3
Samples: 4
Max nTPM: 119.9
Min nTPM: 33.5
RHH5201_R3572
33.5
RHH5229_R3601
119.9
RHH5258_R3630
43.1
RHH5287_R3659
92.8
Non-Vd2 gdTCR nTPM: 36.6
Samples: 4
Max nTPM: 40.7
Min nTPM: 30.9
RHH5235_R3607
40.7
RHH5264_R3636
35.4
RHH5207_R3578
30.9
RHH5299_R3665
39.5
T-reg nTPM: 50.6
Samples: 4
Max nTPM: 73.3
Min nTPM: 33.2
RHH5301_R3667
50.8
RHH5237_R3609
33.2
RHH5266_R3638
73.3
RHH5209_R3580
45.0
Terminal effector memory CD4 T-cell nTPM: 45.8
Samples: 2
Max nTPM: 48.4
Min nTPM: 43.1
RHH5243_R3615
48.4
RHH5272_R3644
43.1
Terminal effector memory CD8 T-cell nTPM: 46.4
Samples: 4
Max nTPM: 71.3
Min nTPM: 22.7
RHH5232_R3604
22.7
RHH5204_R3575
71.3
RHH5261_R3633
59.3
RHH5296_R3662
32.3
Vd2 gdTCR nTPM: 55.0
Samples: 4
Max nTPM: 109.7
Min nTPM: 29.3
RHH5234_R3606
29.3
RHH5206_R3577
109.7
RHH5263_R3635
46.4
RHH5298_R3664
34.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
