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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4486.4
nTPM
Monaco:
1788.3
nTPM
Schmiedel:
740.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4486.4
HPA sample
nTPM
gdT-cell nTPM: 2020.4
Samples: 6
Max nTPM: 3142.0
Min nTPM: 1390.0
P10809_1007
3142.0
P10809_1022
1783.5
P10809_1041
2096.4
P10809_1060
1390.0
P10809_1077
1978.9
P10809_1098
1731.5
MAIT T-cell nTPM: 2982.9
Samples: 6
Max nTPM: 3555.9
Min nTPM: 2588.0
P10809_1006
3555.9
P10809_1024
3161.4
P10809_1043
2764.4
P10809_1062
2864.5
P10809_1083
2588.0
P10809_1097
2963.2
Memory CD4 T-cell nTPM: 3494.4
Samples: 6
Max nTPM: 5118.7
Min nTPM: 2525.0
P10809_1014
5118.7
P10809_1026
3876.3
P10809_1045
3461.2
P10809_1064
2525.0
P10809_1086
2720.8
P10809_1113
3264.1
Memory CD8 T-cell nTPM: 2705.1
Samples: 5
Max nTPM: 3738.3
Min nTPM: 2102.4
P10809_1012
3738.3
P10809_1027
2723.2
P10809_1046
2804.1
P10809_1065
2102.4
P10809_1111
2157.7
Naive CD4 T-cell nTPM: 4486.4
Samples: 6
Max nTPM: 7653.1
Min nTPM: 2967.6
P10809_1015
7653.1
P10809_1030
5016.9
P10809_1049
3071.1
P10809_1068
4187.2
P10809_1085
2967.6
P10809_1112
4022.3
Naive CD8 T-cell nTPM: 3699.1
Samples: 6
Max nTPM: 8311.0
Min nTPM: 2017.0
P10809_1016
8311.0
P10809_1031
3338.2
P10809_1050
2949.4
P10809_1069
2742.3
P10809_1087
2017.0
P10809_1110
2836.5
T-reg nTPM: 2484.5
Samples: 6
Max nTPM: 2857.6
Min nTPM: 2055.0
P10809_1018
2848.3
P10809_1037
2857.6
P10809_1056
2055.0
P10809_1075
2386.4
P10809_1094
2581.6
P10809_1106
2178.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1788.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1044.9
Samples: 4
Max nTPM: 1522.0
Min nTPM: 531.0
RHH5202_R3573
531.0
RHH5230_R3602
1249.7
RHH5259_R3631
1522.0
RHH5288_R3660
877.0
Effector memory CD8 T-cell nTPM: 389.0
Samples: 4
Max nTPM: 670.3
Min nTPM: 290.3
RHH5203_R3574
290.3
RHH5231_R3603
301.3
RHH5260_R3632
670.3
RHH5289_R3661
293.9
MAIT T-cell nTPM: 908.5
Samples: 4
Max nTPM: 1112.1
Min nTPM: 577.7
RHH5233_R3605
577.7
RHH5205_R3576
1050.8
RHH5262_R3634
1112.1
RHH5297_R3663
893.5
Memory CD4 T-cell TFH nTPM: 756.2
Samples: 4
Max nTPM: 936.4
Min nTPM: 570.5
RHH5300_R3666
936.4
RHH5236_R3608
767.8
RHH5265_R3637
749.9
RHH5208_R3579
570.5
Memory CD4 T-cell Th1 nTPM: 1410.5
Samples: 4
Max nTPM: 2072.9
Min nTPM: 505.1
RHH5210_R3581
505.1
RHH5302_R3668
1554.8
RHH5238_R3610
2072.9
RHH5267_R3639
1509.2
Memory CD4 T-cell Th1/Th17 nTPM: 1108.9
Samples: 4
Max nTPM: 1553.4
Min nTPM: 535.0
RHH5303_R3669
806.0
RHH5211_R3582
535.0
RHH5239_R3611
1541.1
RHH5268_R3640
1553.4
Memory CD4 T-cell Th17 nTPM: 1066.6
Samples: 4
Max nTPM: 1660.8
Min nTPM: 579.1
RHH5304_R3670
1660.8
RHH5212_R3583
579.1
RHH5240_R3612
931.1
RHH5269_R3641
1095.3
Memory CD4 T-cell Th2 nTPM: 1240.2
Samples: 4
Max nTPM: 2090.1
Min nTPM: 836.2
RHH5305_R3671
2090.1
RHH5213_R3584
836.2
RHH5241_R3613
959.3
RHH5270_R3642
1075.2
Naive CD4 T-cell nTPM: 1788.3
Samples: 4
Max nTPM: 2597.3
Min nTPM: 1127.9
RHH5306_R3672
2597.3
RHH5214_R3585
1653.2
RHH5242_R3614
1127.9
RHH5271_R3643
1774.7
Naive CD8 T-cell nTPM: 1375.3
Samples: 4
Max nTPM: 1929.4
Min nTPM: 852.3
RHH5201_R3572
860.1
RHH5229_R3601
1929.4
RHH5258_R3630
852.3
RHH5287_R3659
1859.3
Non-Vd2 gdTCR nTPM: 561.1
Samples: 4
Max nTPM: 802.4
Min nTPM: 367.1
RHH5235_R3607
802.4
RHH5264_R3636
367.1
RHH5207_R3578
421.2
RHH5299_R3665
653.5
T-reg nTPM: 1020.4
Samples: 4
Max nTPM: 1329.4
Min nTPM: 517.6
RHH5301_R3667
1287.4
RHH5237_R3609
517.6
RHH5266_R3638
1329.4
RHH5209_R3580
947.3
Terminal effector memory CD4 T-cell nTPM: 646.5
Samples: 2
Max nTPM: 769.5
Min nTPM: 523.4
RHH5243_R3615
769.5
RHH5272_R3644
523.4
Terminal effector memory CD8 T-cell nTPM: 706.8
Samples: 4
Max nTPM: 1099.6
Min nTPM: 255.5
RHH5232_R3604
255.5
RHH5204_R3575
1099.6
RHH5261_R3633
873.7
RHH5296_R3662
598.2
Vd2 gdTCR nTPM: 1145.8
Samples: 4
Max nTPM: 1650.9
Min nTPM: 749.7
RHH5234_R3606
749.7
RHH5206_R3577
1650.9
RHH5263_R3635
1025.2
RHH5298_R3664
1157.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.