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IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
B-cells
B-CELLS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:10614.3 nTPM
Monaco:21552.2 nTPM
Schmiedel:2200.1 TPM

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 10614.3
HPA sample nTPM
Memory B-cell
nTPM: 10614.4
Samples: 6

Max nTPM: 12939.6
Min nTPM: 6405.1
P10809_1017 11521.7
P10809_1025 12939.6
P10809_1044 6405.1
P10809_1063 9773.1
P10809_1092 10602.9
P10809_1105 12443.8
Naive B-cell
nTPM: 8457.4
Samples: 6

Max nTPM: 9505.0
Min nTPM: 7387.8
P10809_1011 7387.8
P10809_1029 9463.4
P10809_1048 9505.0
P10809_1067 7440.1
P10809_1091 7520.6
P10809_1104 9427.4

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 21552.2
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 15849.7
Samples: 4

Max nTPM: 19682.0
Min nTPM: 12724.1
RHH5310_R3677 19682.0
RHH5218_R3590 16462.2
RHH5247_R3619 12724.1
RHH5276_R3648 14530.4
Naive B-cell
nTPM: 14363.1
Samples: 4

Max nTPM: 16477.9
Min nTPM: 10849.1
RHH5308_R3675 14233.7
RHH5216_R3588 15891.5
RHH5245_R3617 10849.1
RHH5274_R3646 16477.9
Non-switched memory B-cell
nTPM: 17885.4
Samples: 4

Max nTPM: 19780.2
Min nTPM: 15266.4
RHH5309_R3676 19780.2
RHH5217_R3589 19201.9
RHH5246_R3618 15266.4
RHH5275_R3647 17293.2
Plasmablast
nTPM: 17905.2
Samples: 4

Max nTPM: 20068.9
Min nTPM: 14663.7
RHH5312_R3679 20068.9
RHH5220_R3592 18295.9
RHH5249_R3621 18592.3
RHH5278_R3650 14663.7
Switched memory B-cell
nTPM: 21552.2
Samples: 4

Max nTPM: 25096.4
Min nTPM: 19805.5
RHH5311_R3678 20490.9
RHH5219_R3591 20815.9
RHH5248_R3620 25096.4
RHH5277_R3649 19805.5

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 2200.1
Schmiedel sample id TPM
Naive B-cell
TPM: 2200.1
Samples: 91

Max TPM: 2730.2
Min TPM: 1199.1
B_CELL_NAIVE_1 2730.2
B_CELL_NAIVE_2 2667.4
B_CELL_NAIVE_3 2586.7
B_CELL_NAIVE_4 2585.5
B_CELL_NAIVE_5 2573.8
B_CELL_NAIVE_6 2568.4
B_CELL_NAIVE_7 2564.4
B_CELL_NAIVE_8 2534.1
B_CELL_NAIVE_9 2516.7
B_CELL_NAIVE_10 2515.6
B_CELL_NAIVE_11 2502.9
B_CELL_NAIVE_12 2481.9
B_CELL_NAIVE_13 2477.5
B_CELL_NAIVE_14 2442.7
B_CELL_NAIVE_15 2431.8
B_CELL_NAIVE_16 2429.9
B_CELL_NAIVE_17 2427.3
B_CELL_NAIVE_18 2419.0
B_CELL_NAIVE_19 2404.6
B_CELL_NAIVE_20 2400.5
B_CELL_NAIVE_21 2383.7
B_CELL_NAIVE_22 2383.1
B_CELL_NAIVE_23 2378.1
B_CELL_NAIVE_24 2370.7
B_CELL_NAIVE_25 2367.1
B_CELL_NAIVE_26 2336.5
B_CELL_NAIVE_27 2330.8
B_CELL_NAIVE_28 2323.9
B_CELL_NAIVE_29 2323.3
B_CELL_NAIVE_30 2317.6
B_CELL_NAIVE_31 2289.7
B_CELL_NAIVE_32 2285.8
B_CELL_NAIVE_33 2275.4
B_CELL_NAIVE_34 2274.4
B_CELL_NAIVE_35 2264.2
B_CELL_NAIVE_36 2251.0
B_CELL_NAIVE_37 2250.2
B_CELL_NAIVE_38 2248.3
B_CELL_NAIVE_39 2247.5
B_CELL_NAIVE_40 2243.1
B_CELL_NAIVE_41 2239.0
B_CELL_NAIVE_42 2238.3
B_CELL_NAIVE_43 2234.6
B_CELL_NAIVE_44 2219.9
B_CELL_NAIVE_45 2216.5
B_CELL_NAIVE_46 2205.1
B_CELL_NAIVE_47 2188.1
B_CELL_NAIVE_48 2178.5
B_CELL_NAIVE_49 2169.1
B_CELL_NAIVE_50 2168.0
B_CELL_NAIVE_51 2160.9
B_CELL_NAIVE_52 2159.7
B_CELL_NAIVE_53 2157.2
B_CELL_NAIVE_54 2145.5
B_CELL_NAIVE_55 2137.4
B_CELL_NAIVE_56 2122.9
B_CELL_NAIVE_57 2122.1
B_CELL_NAIVE_58 2110.3
B_CELL_NAIVE_59 2109.5
B_CELL_NAIVE_60 2098.0
B_CELL_NAIVE_61 2091.8
B_CELL_NAIVE_62 2074.8
B_CELL_NAIVE_63 2069.9
B_CELL_NAIVE_64 2064.5
B_CELL_NAIVE_65 2062.5
B_CELL_NAIVE_66 2057.7
B_CELL_NAIVE_67 2056.9
B_CELL_NAIVE_68 2041.2
B_CELL_NAIVE_69 2032.1
B_CELL_NAIVE_70 2030.1
B_CELL_NAIVE_71 2019.5
B_CELL_NAIVE_72 2013.9
B_CELL_NAIVE_73 2012.8
B_CELL_NAIVE_74 1993.8
B_CELL_NAIVE_75 1991.5
B_CELL_NAIVE_76 1990.1
B_CELL_NAIVE_77 1988.9
B_CELL_NAIVE_78 1983.8
B_CELL_NAIVE_79 1981.2
B_CELL_NAIVE_80 1952.2
B_CELL_NAIVE_81 1944.8
B_CELL_NAIVE_82 1931.4
B_CELL_NAIVE_83 1927.9
B_CELL_NAIVE_84 1916.7
B_CELL_NAIVE_85 1911.5
B_CELL_NAIVE_86 1911.2
B_CELL_NAIVE_87 1871.3
B_CELL_NAIVE_88 1816.4
B_CELL_NAIVE_89 1805.8
B_CELL_NAIVE_90 1680.7
B_CELL_NAIVE_91 1199.1
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