HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:55.3 nTPM
HPA Brain:125.2 nTPM
GTEx:55.3 nTPM
FANTOM5:88.4 Scaled Tags Per Million
Pig:99.7 nTPM
Mouse:202.3 nTPM
Allen mouse:13.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007043Antibody HPA007044Antibody CAB010052
Glial cells Not detectedNot detectedNot detected
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 125.2
Sample id Sample description nTPM
Hippocampus
nTPM: 90.0
1898 Male, age 80, left hemisphere 131.8
2148 Female, age 91, left hemisphere 92.3
1855 Male, age 76, left hemisphere 91.4
2621 Female, age 67, right hemisphere 90.3
2529 Female, age 94, left hemisphere 71.2
1911 Female, age 85, right hemisphere 62.7
Dentate gyrus
nTPM: 93.8
1927 Female, age 91, both hemispheres 129.8
2010 Male, age 76, both hemispheres 110.1
2246 Female, age 85, both hemispheres 84.6
2531 Female, age 67, both hemispheres 84.0
2528 Male, age 74, both hemispheres 77.1
2530 Female, age 94, left hemisphere 77.1
Entorhinal gyrus
nTPM: 92.0
2764 Male, age 80, right hemisphere 126.2
1938 Female, age 85, left hemisphere 103.8
2613 Female, age 94, left hemisphere 99.5
1787 Male, age 76, left hemisphere 89.2
2117 Female, age 91, right hemisphere 66.7
2686 Male, age 75, right hemisphere 66.6
Hippocampus, CA1
nTPM: 107.7
2749 Male, age 80, left hemisphere 149.4
2045 Male, age 76, both hemispheres 119.3
1873 Female, age 85, both hemispheres 104.2
2527 Male, age 74, both hemispheres 92.8
2082 Female, age 91, right hemisphere 73.1
Hippocampus, CA2
nTPM: 94.4
1963 Male, age 80, left hemisphere 128.6
1892 Male, age 76, both hemispheres 127.0
2249 Male, age 74, both hemispheres 83.8
1940 Female, age 85, left hemisphere 83.7
2437 Female, age 94, left hemisphere 72.8
2113 Female, age 91, right hemisphere 70.5
Hippocampus, CA3
nTPM: 97.1
2436 Male, age 74, both hemispheres 110.8
2137 Male, age 80, left hemisphere 110.1
1867 Male, age 76, both hemispheres 107.2
2620 Female, age 94, left hemisphere 97.2
2861 Female, age 67, both hemispheres 80.0
1891 Female, age 85, both hemispheres 77.3
Parahippocampal cortex
nTPM: 94.9
1850 Male, age 80, both hemispheres 137.1
1990 Female, age 91, right hemisphere 106.5
1933 Female, age 85, both hemispheres 103.1
2245 Female, age 91, both hemispheres 100.7
2532 Female, age 72, left hemisphere 98.9
2250 Female, age 67, right hemisphere 88.6
2693 Female, age 94, both hemispheres 84.6
2018 Male, age 76, both hemispheres 83.8
2622 Female, age 67, right hemisphere 79.5
2692 Male, age 74, both hemispheres 66.7
Perirhinal gyrus
nTPM: 125.2
1847 Female, age 91, left hemisphere 158.6
1794 Male, age 80, right hemisphere 137.8
1841 Female, age 85, right hemisphere 120.1
2521 Female, age 94, right hemisphere 110.3
2848 Male, age 76, right hemisphere 99.0
Subiculum
nTPM: 75.5
1977 Female, age 85, both hemispheres 97.7
1901 Male, age 80, both hemispheres 86.1
2438 Female, age 94, left hemisphere 74.1
2619 Male, age 74, both hemispheres 69.0
2729 Female, age 91, right hemisphere 67.4
2042 Male, age 76, both hemispheres 58.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.3
Samples: 197

Max nTPM: 135.8
Min nTPM: 8.1
Std nTPM: 23.9
Median nTPM: 52.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 135.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 132.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 111.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 110.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 107.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 105.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 101.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 100.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 99.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 97.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 97.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.4
FF:10169-103B7 60 years, female 103.8
FF:10153-102I9 76 years, female 73.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 99.7
Pig sample Sample description nTPM
Subiculum
nTPM: 90.0
Samples: 4

Max nTPM: 111.2
Min nTPM: 76.4
Sample A Female 111.2
Sample B Female 82.0
Sample C Male 90.4
Sample D Male 76.4
Dorsal hippocampus
nTPM: 94.7
Samples: 4

Max nTPM: 109.3
Min nTPM: 80.8
Sample A Female 109.3
Sample B Female 103.6
Sample C Male 84.9
Sample D Male 80.8
Entorhinal cortex
nTPM: 99.8
Samples: 4

Max nTPM: 112.7
Min nTPM: 88.4
Sample A Female 112.7
Sample B Female 102.0
Sample C Male 95.9
Sample D Male 88.4
Ventral hippocampus
nTPM: 98.2
Samples: 4

Max nTPM: 120.7
Min nTPM: 73.3
Sample A Female 92.8
Sample B Female 73.3
Sample C Male 120.7
Sample D Male 106.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 202.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 202.3
Samples: 4

Max nTPM: 259.0
Min nTPM: 179.2
Sample A Male 187.8
Sample B Male 183.1
Sample C Female 179.2
Sample D Female 259.0
Hippocampal formation
nTPM: 195.8
Samples: 4

Max nTPM: 218.3
Min nTPM: 173.6
Sample A Male 173.6
Sample B Male 206.6
Sample C Female 218.3
Sample D Female 184.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.6
69735054 Antisense, RP_050503_02_A01, Mouse strain C57BL/6J (56 days, male) 13.6

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