We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.6
nTPM
Monaco:
203.3
nTPM
Schmiedel:
129.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.6
HPA sample
nTPM
gdT-cell nTPM: 41.3
Samples: 6
Max nTPM: 63.5
Min nTPM: 32.4
P10809_1007
36.9
P10809_1022
63.5
P10809_1041
38.3
P10809_1060
38.8
P10809_1077
32.4
P10809_1098
37.9
MAIT T-cell nTPM: 68.6
Samples: 6
Max nTPM: 87.6
Min nTPM: 38.4
P10809_1006
65.1
P10809_1024
87.6
P10809_1043
80.9
P10809_1062
72.1
P10809_1083
38.4
P10809_1097
67.7
Memory CD4 T-cell nTPM: 47.9
Samples: 6
Max nTPM: 58.7
Min nTPM: 38.3
P10809_1014
48.4
P10809_1026
47.1
P10809_1045
56.5
P10809_1064
38.3
P10809_1086
38.3
P10809_1113
58.7
Memory CD8 T-cell nTPM: 47.7
Samples: 5
Max nTPM: 52.5
Min nTPM: 34.4
P10809_1012
50.9
P10809_1027
50.7
P10809_1046
50.2
P10809_1065
34.4
P10809_1111
52.5
Naive CD4 T-cell nTPM: 41.4
Samples: 6
Max nTPM: 52.2
Min nTPM: 30.5
P10809_1015
37.3
P10809_1030
40.2
P10809_1049
30.5
P10809_1068
42.9
P10809_1085
45.4
P10809_1112
52.2
Naive CD8 T-cell nTPM: 34.0
Samples: 6
Max nTPM: 41.4
Min nTPM: 26.1
P10809_1016
38.1
P10809_1031
26.1
P10809_1050
35.7
P10809_1069
34.0
P10809_1087
28.5
P10809_1110
41.4
T-reg nTPM: 57.5
Samples: 6
Max nTPM: 70.6
Min nTPM: 46.6
P10809_1018
59.5
P10809_1037
64.8
P10809_1056
46.6
P10809_1075
52.0
P10809_1094
70.6
P10809_1106
51.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 133.5
Samples: 4
Max nTPM: 149.5
Min nTPM: 117.7
RHH5202_R3573
142.3
RHH5230_R3602
124.6
RHH5259_R3631
149.5
RHH5288_R3660
117.7
Effector memory CD8 T-cell nTPM: 134.7
Samples: 4
Max nTPM: 148.6
Min nTPM: 124.3
RHH5203_R3574
124.3
RHH5231_R3603
125.4
RHH5260_R3632
148.6
RHH5289_R3661
140.5
MAIT T-cell nTPM: 195.1
Samples: 4
Max nTPM: 269.9
Min nTPM: 151.1
RHH5233_R3605
161.9
RHH5205_R3576
269.9
RHH5262_R3634
197.3
RHH5297_R3663
151.1
Memory CD4 T-cell TFH nTPM: 142.1
Samples: 4
Max nTPM: 153.6
Min nTPM: 121.1
RHH5300_R3666
121.1
RHH5236_R3608
142.8
RHH5265_R3637
153.6
RHH5208_R3579
150.7
Memory CD4 T-cell Th1 nTPM: 155.9
Samples: 4
Max nTPM: 176.6
Min nTPM: 137.0
RHH5210_R3581
166.7
RHH5302_R3668
137.0
RHH5238_R3610
176.6
RHH5267_R3639
143.3
Memory CD4 T-cell Th1/Th17 nTPM: 187.6
Samples: 4
Max nTPM: 210.5
Min nTPM: 163.6
RHH5303_R3669
201.3
RHH5211_R3582
210.5
RHH5239_R3611
175.1
RHH5268_R3640
163.6
Memory CD4 T-cell Th17 nTPM: 203.3
Samples: 4
Max nTPM: 240.8
Min nTPM: 184.8
RHH5304_R3670
184.8
RHH5212_R3583
189.7
RHH5240_R3612
240.8
RHH5269_R3641
198.0
Memory CD4 T-cell Th2 nTPM: 170.6
Samples: 4
Max nTPM: 211.0
Min nTPM: 134.4
RHH5305_R3671
161.7
RHH5213_R3584
211.0
RHH5241_R3613
134.4
RHH5270_R3642
175.4
Naive CD4 T-cell nTPM: 123.4
Samples: 4
Max nTPM: 130.6
Min nTPM: 112.1
RHH5306_R3672
112.1
RHH5214_R3585
128.9
RHH5242_R3614
121.9
RHH5271_R3643
130.6
Naive CD8 T-cell nTPM: 137.6
Samples: 4
Max nTPM: 148.5
Min nTPM: 123.1
RHH5201_R3572
139.3
RHH5229_R3601
148.5
RHH5258_R3630
123.1
RHH5287_R3659
139.3
Non-Vd2 gdTCR nTPM: 119.0
Samples: 4
Max nTPM: 132.6
Min nTPM: 100.2
RHH5235_R3607
132.6
RHH5264_R3636
115.8
RHH5207_R3578
127.5
RHH5299_R3665
100.2
T-reg nTPM: 133.9
Samples: 4
Max nTPM: 155.9
Min nTPM: 116.1
RHH5301_R3667
120.6
RHH5237_R3609
142.8
RHH5266_R3638
116.1
RHH5209_R3580
155.9
Terminal effector memory CD4 T-cell nTPM: 111.4
Samples: 2
Max nTPM: 113.4
Min nTPM: 109.4
RHH5243_R3615
109.4
RHH5272_R3644
113.4
Terminal effector memory CD8 T-cell nTPM: 115.9
Samples: 4
Max nTPM: 138.6
Min nTPM: 101.6
RHH5232_R3604
138.6
RHH5204_R3575
106.3
RHH5261_R3633
117.0
RHH5296_R3662
101.6
Vd2 gdTCR nTPM: 116.5
Samples: 4
Max nTPM: 161.8
Min nTPM: 90.9
RHH5234_R3606
114.4
RHH5206_R3577
98.7
RHH5263_R3635
161.8
RHH5298_R3664
90.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
