HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.2 nTPM
HPA Brain:22.5 nTPM
GTEx:8.2 nTPM
FANTOM5:29.7 Scaled Tags Per Million
Pig:46.7 nTPM
Mouse:4.8 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.5
Sample id Sample description nTPM
Hippocampus
nTPM: 17.7
2621 Female, age 67, right hemisphere 24.0
1855 Male, age 76, left hemisphere 19.3
1898 Male, age 80, left hemisphere 17.5
1911 Female, age 85, right hemisphere 16.9
2529 Female, age 94, left hemisphere 16.2
2148 Female, age 91, left hemisphere 12.3
Dentate gyrus
nTPM: 22.5
2010 Male, age 76, both hemispheres 46.3
2530 Female, age 94, left hemisphere 21.0
2531 Female, age 67, both hemispheres 20.9
1927 Female, age 91, both hemispheres 15.8
2528 Male, age 74, both hemispheres 15.8
2246 Female, age 85, both hemispheres 15.4
Entorhinal gyrus
nTPM: 15.6
2686 Male, age 75, right hemisphere 20.6
2117 Female, age 91, right hemisphere 19.7
1787 Male, age 76, left hemisphere 18.7
2764 Male, age 80, right hemisphere 13.3
1938 Female, age 85, left hemisphere 12.1
2613 Female, age 94, left hemisphere 9.0
Hippocampus, CA1
nTPM: 18.9
2045 Male, age 76, both hemispheres 27.2
2749 Male, age 80, left hemisphere 21.6
1873 Female, age 85, both hemispheres 18.1
2082 Female, age 91, right hemisphere 16.4
2527 Male, age 74, both hemispheres 11.0
Hippocampus, CA2
nTPM: 19.7
1940 Female, age 85, left hemisphere 24.2
2249 Male, age 74, both hemispheres 21.6
1892 Male, age 76, both hemispheres 20.8
1963 Male, age 80, left hemisphere 18.9
2113 Female, age 91, right hemisphere 17.2
2437 Female, age 94, left hemisphere 15.4
Hippocampus, CA3
nTPM: 20.0
1867 Male, age 76, both hemispheres 33.3
2137 Male, age 80, left hemisphere 25.9
1891 Female, age 85, both hemispheres 18.2
2620 Female, age 94, left hemisphere 16.4
2861 Female, age 67, both hemispheres 15.6
2436 Male, age 74, both hemispheres 10.7
Parahippocampal cortex
nTPM: 17.0
2018 Male, age 76, both hemispheres 34.0
2532 Female, age 72, left hemisphere 20.2
2250 Female, age 67, right hemisphere 18.6
2245 Female, age 91, both hemispheres 17.3
2622 Female, age 67, right hemisphere 15.9
1990 Female, age 91, right hemisphere 14.1
2693 Female, age 94, both hemispheres 14.0
1850 Male, age 80, both hemispheres 12.7
1933 Female, age 85, both hemispheres 11.9
2692 Male, age 74, both hemispheres 11.9
Perirhinal gyrus
nTPM: 15.2
1794 Male, age 80, right hemisphere 18.5
2848 Male, age 76, right hemisphere 16.1
1841 Female, age 85, right hemisphere 16.0
2521 Female, age 94, right hemisphere 13.9
1847 Female, age 91, left hemisphere 11.5
Subiculum
nTPM: 19.6
2042 Male, age 76, both hemispheres 34.9
1901 Male, age 80, both hemispheres 23.7
1977 Female, age 85, both hemispheres 17.7
2729 Female, age 91, right hemisphere 15.4
2619 Male, age 74, both hemispheres 13.3
2438 Female, age 94, left hemisphere 12.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.2
Samples: 197

Max nTPM: 24.5
Min nTPM: 2.9
Std nTPM: 3.5
Median nTPM: 7.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 22.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 18.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 18.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 17.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 15.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 15.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 15.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 15.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.7
FF:10153-102I9 76 years, female 40.7
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.7
Pig sample Sample description nTPM
Subiculum
nTPM: 23.6
Samples: 4

Max nTPM: 28.6
Min nTPM: 18.1
Sample A Female 28.6
Sample B Female 27.3
Sample C Male 18.1
Sample D Male 20.5
Dorsal hippocampus
nTPM: 46.7
Samples: 4

Max nTPM: 73.7
Min nTPM: 17.9
Sample A Female 73.7
Sample B Female 36.6
Sample C Male 58.6
Sample D Male 17.9
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 31.6
Min nTPM: 18.8
Sample A Female 20.7
Sample B Female 31.6
Sample C Male 18.8
Sample D Male 25.9
Ventral hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 39.0
Min nTPM: 19.4
Sample A Female 35.0
Sample B Female 19.4
Sample C Male 29.0
Sample D Male 39.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 5.1
Min nTPM: 2.9
Sample A Male 5.1
Sample B Male 4.4
Sample C Female 3.5
Sample D Female 2.9
Hippocampal formation
nTPM: 4.9
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.1
Sample A Male 4.1
Sample B Male 5.0
Sample C Female 6.0
Sample D Female 4.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68637473 Antisense, RP_050126_01_A03, Mouse strain C57BL/6J (56 days, male) 0.5

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