HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.2 nTPM
HPA Brain:19.4 nTPM
GTEx:15.2 nTPM
FANTOM5:24.0 Scaled Tags Per Million
Pig:9.0 nTPM
Mouse:15.9 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060265
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.4
Sample id Sample description nTPM
Hippocampus
nTPM: 19.4
2529 Female, age 94, left hemisphere 22.1
2621 Female, age 67, right hemisphere 21.2
2148 Female, age 91, left hemisphere 20.5
1855 Male, age 76, left hemisphere 18.5
1911 Female, age 85, right hemisphere 17.7
1898 Male, age 80, left hemisphere 16.7
Dentate gyrus
nTPM: 18.7
2531 Female, age 67, both hemispheres 22.5
2530 Female, age 94, left hemisphere 19.5
2246 Female, age 85, both hemispheres 19.4
2528 Male, age 74, both hemispheres 18.6
1927 Female, age 91, both hemispheres 17.1
2010 Male, age 76, both hemispheres 15.3
Entorhinal gyrus
nTPM: 19.2
2117 Female, age 91, right hemisphere 21.3
2686 Male, age 75, right hemisphere 20.0
2613 Female, age 94, left hemisphere 19.4
1787 Male, age 76, left hemisphere 18.4
2764 Male, age 80, right hemisphere 18.2
1938 Female, age 85, left hemisphere 17.9
Hippocampus, CA1
nTPM: 16.1
2045 Male, age 76, both hemispheres 18.1
2082 Female, age 91, right hemisphere 17.9
2527 Male, age 74, both hemispheres 17.8
1873 Female, age 85, both hemispheres 14.7
2749 Male, age 80, left hemisphere 12.1
Hippocampus, CA2
nTPM: 16.3
1940 Female, age 85, left hemisphere 17.7
1892 Male, age 76, both hemispheres 17.5
2437 Female, age 94, left hemisphere 17.5
1963 Male, age 80, left hemisphere 15.4
2113 Female, age 91, right hemisphere 15.0
2249 Male, age 74, both hemispheres 14.6
Hippocampus, CA3
nTPM: 19.2
2861 Female, age 67, both hemispheres 26.0
2620 Female, age 94, left hemisphere 23.9
1867 Male, age 76, both hemispheres 18.3
1891 Female, age 85, both hemispheres 16.5
2137 Male, age 80, left hemisphere 15.7
2436 Male, age 74, both hemispheres 14.7
Parahippocampal cortex
nTPM: 17.6
2532 Female, age 72, left hemisphere 20.5
2622 Female, age 67, right hemisphere 19.9
2692 Male, age 74, both hemispheres 19.3
2245 Female, age 91, both hemispheres 18.9
2018 Male, age 76, both hemispheres 17.0
2693 Female, age 94, both hemispheres 17.0
1933 Female, age 85, both hemispheres 16.4
2250 Female, age 67, right hemisphere 16.3
1990 Female, age 91, right hemisphere 16.2
1850 Male, age 80, both hemispheres 14.9
Perirhinal gyrus
nTPM: 16.2
2848 Male, age 76, right hemisphere 17.7
1794 Male, age 80, right hemisphere 16.6
1847 Female, age 91, left hemisphere 16.3
2521 Female, age 94, right hemisphere 16.2
1841 Female, age 85, right hemisphere 14.3
Subiculum
nTPM: 19.1
2619 Male, age 74, both hemispheres 21.2
2042 Male, age 76, both hemispheres 20.9
2438 Female, age 94, left hemisphere 20.3
2729 Female, age 91, right hemisphere 18.9
1901 Male, age 80, both hemispheres 17.2
1977 Female, age 85, both hemispheres 16.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.2
Samples: 197

Max nTPM: 24.8
Min nTPM: 6.9
Std nTPM: 3.1
Median nTPM: 15.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 24.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 24.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 24.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 23.0
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 22.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 22.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 22.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 22.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 22.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 21.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 21.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.0
FF:10153-102I9 76 years, female 27.3
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.0
Pig sample Sample description nTPM
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.8
Sample A Female 9.8
Sample B Female 7.8
Sample C Male 7.8
Sample D Male 8.4
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.7
Sample A Female 9.3
Sample B Female 7.7
Sample C Male 9.8
Sample D Male 7.9
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.7
Sample A Female 8.1
Sample B Female 6.7
Sample C Male 8.1
Sample D Male 6.8
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 12.0
Min nTPM: 6.8
Sample A Female 7.6
Sample B Female 6.8
Sample C Male 12.0
Sample D Male 9.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 15.1
Min nTPM: 12.1
Sample A Male 13.5
Sample B Male 14.4
Sample C Female 15.1
Sample D Female 12.1
Hippocampal formation
nTPM: 15.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 14.1
Sample A Male 14.1
Sample B Male 15.2
Sample C Female 14.8
Sample D Female 19.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
413775 Antisense, RP_040809_01_C07, Mouse strain C57BL/6J (56 days, male) 4.2

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