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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
215.3
nTPM
Monaco:
300.2
nTPM
Schmiedel:
134.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
215.3
HPA sample
nTPM
gdT-cell nTPM: 96.4
Samples: 6
Max nTPM: 117.2
Min nTPM: 73.4
P10809_1007
73.4
P10809_1022
117.2
P10809_1041
109.6
P10809_1060
96.4
P10809_1077
75.9
P10809_1098
105.7
MAIT T-cell nTPM: 95.8
Samples: 6
Max nTPM: 127.3
Min nTPM: 70.3
P10809_1006
70.3
P10809_1024
121.1
P10809_1043
127.3
P10809_1062
96.4
P10809_1083
71.4
P10809_1097
88.4
Memory CD4 T-cell nTPM: 166.3
Samples: 6
Max nTPM: 213.2
Min nTPM: 123.4
P10809_1014
147.5
P10809_1026
186.5
P10809_1045
213.2
P10809_1064
136.1
P10809_1086
123.4
P10809_1113
191.0
Memory CD8 T-cell nTPM: 114.6
Samples: 5
Max nTPM: 132.3
Min nTPM: 88.9
P10809_1012
105.7
P10809_1027
120.5
P10809_1046
132.3
P10809_1065
88.9
P10809_1111
125.4
Naive CD4 T-cell nTPM: 168.7
Samples: 6
Max nTPM: 227.0
Min nTPM: 117.8
P10809_1015
117.8
P10809_1030
162.6
P10809_1049
227.0
P10809_1068
167.4
P10809_1085
156.0
P10809_1112
181.5
Naive CD8 T-cell nTPM: 107.0
Samples: 6
Max nTPM: 134.3
Min nTPM: 78.1
P10809_1016
88.6
P10809_1031
102.1
P10809_1050
134.3
P10809_1069
113.7
P10809_1087
78.1
P10809_1110
124.9
T-reg nTPM: 215.3
Samples: 6
Max nTPM: 249.5
Min nTPM: 192.9
P10809_1018
192.9
P10809_1037
217.8
P10809_1056
249.5
P10809_1075
204.8
P10809_1094
205.5
P10809_1106
221.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
300.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 209.3
Samples: 4
Max nTPM: 234.3
Min nTPM: 195.3
RHH5202_R3573
234.3
RHH5230_R3602
208.8
RHH5259_R3631
195.3
RHH5288_R3660
198.8
Effector memory CD8 T-cell nTPM: 190.2
Samples: 4
Max nTPM: 220.4
Min nTPM: 167.3
RHH5203_R3574
220.4
RHH5231_R3603
167.3
RHH5260_R3632
182.8
RHH5289_R3661
190.4
MAIT T-cell nTPM: 135.7
Samples: 4
Max nTPM: 159.6
Min nTPM: 111.1
RHH5233_R3605
136.3
RHH5205_R3576
159.6
RHH5262_R3634
135.8
RHH5297_R3663
111.1
Memory CD4 T-cell TFH nTPM: 254.5
Samples: 4
Max nTPM: 273.4
Min nTPM: 240.0
RHH5300_R3666
240.0
RHH5236_R3608
248.5
RHH5265_R3637
255.9
RHH5208_R3579
273.4
Memory CD4 T-cell Th1 nTPM: 236.8
Samples: 4
Max nTPM: 273.2
Min nTPM: 214.7
RHH5210_R3581
215.6
RHH5302_R3668
243.6
RHH5238_R3610
214.7
RHH5267_R3639
273.2
Memory CD4 T-cell Th1/Th17 nTPM: 227.8
Samples: 4
Max nTPM: 279.0
Min nTPM: 186.3
RHH5303_R3669
230.4
RHH5211_R3582
279.0
RHH5239_R3611
186.3
RHH5268_R3640
215.3
Memory CD4 T-cell Th17 nTPM: 264.9
Samples: 4
Max nTPM: 324.2
Min nTPM: 235.0
RHH5304_R3670
258.0
RHH5212_R3583
242.3
RHH5240_R3612
324.2
RHH5269_R3641
235.0
Memory CD4 T-cell Th2 nTPM: 276.5
Samples: 4
Max nTPM: 291.9
Min nTPM: 257.7
RHH5305_R3671
257.7
RHH5213_R3584
291.9
RHH5241_R3613
265.1
RHH5270_R3642
291.2
Naive CD4 T-cell nTPM: 236.6
Samples: 4
Max nTPM: 288.5
Min nTPM: 203.5
RHH5306_R3672
203.5
RHH5214_R3585
240.3
RHH5242_R3614
213.9
RHH5271_R3643
288.5
Naive CD8 T-cell nTPM: 160.4
Samples: 4
Max nTPM: 197.7
Min nTPM: 108.2
RHH5201_R3572
197.7
RHH5229_R3601
108.2
RHH5258_R3630
160.3
RHH5287_R3659
175.3
Non-Vd2 gdTCR nTPM: 141.1
Samples: 4
Max nTPM: 160.4
Min nTPM: 126.1
RHH5235_R3607
150.5
RHH5264_R3636
160.4
RHH5207_R3578
126.1
RHH5299_R3665
127.4
T-reg nTPM: 300.2
Samples: 4
Max nTPM: 347.4
Min nTPM: 231.3
RHH5301_R3667
231.3
RHH5237_R3609
340.3
RHH5266_R3638
347.4
RHH5209_R3580
281.7
Terminal effector memory CD4 T-cell nTPM: 144.0
Samples: 2
Max nTPM: 152.0
Min nTPM: 135.9
RHH5243_R3615
135.9
RHH5272_R3644
152.0
Terminal effector memory CD8 T-cell nTPM: 136.8
Samples: 4
Max nTPM: 167.2
Min nTPM: 106.5
RHH5232_R3604
159.2
RHH5204_R3575
106.5
RHH5261_R3633
167.2
RHH5296_R3662
114.3
Vd2 gdTCR nTPM: 138.7
Samples: 4
Max nTPM: 177.6
Min nTPM: 105.3
RHH5234_R3606
133.2
RHH5206_R3577
138.6
RHH5263_R3635
177.6
RHH5298_R3664
105.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
