We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
55.0
nTPM
Monaco:
95.1
nTPM
Schmiedel:
46.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.0
HPA sample
nTPM
gdT-cell nTPM: 50.8
Samples: 6
Max nTPM: 63.3
Min nTPM: 38.1
P10809_1007
41.8
P10809_1022
57.5
P10809_1041
63.3
P10809_1060
38.1
P10809_1077
42.3
P10809_1098
61.5
MAIT T-cell nTPM: 46.9
Samples: 6
Max nTPM: 54.9
Min nTPM: 37.7
P10809_1006
48.1
P10809_1024
54.9
P10809_1043
48.7
P10809_1062
49.4
P10809_1083
37.7
P10809_1097
42.4
Memory CD4 T-cell nTPM: 43.2
Samples: 6
Max nTPM: 55.3
Min nTPM: 34.4
P10809_1014
39.9
P10809_1026
35.7
P10809_1045
55.3
P10809_1064
34.4
P10809_1086
44.6
P10809_1113
49.3
Memory CD8 T-cell nTPM: 45.4
Samples: 5
Max nTPM: 48.4
Min nTPM: 38.2
P10809_1012
47.3
P10809_1027
46.1
P10809_1046
48.4
P10809_1065
38.2
P10809_1111
46.9
Naive CD4 T-cell nTPM: 39.8
Samples: 6
Max nTPM: 55.0
Min nTPM: 31.1
P10809_1015
39.0
P10809_1030
55.0
P10809_1049
32.6
P10809_1068
43.8
P10809_1085
31.1
P10809_1112
37.5
Naive CD8 T-cell nTPM: 41.1
Samples: 6
Max nTPM: 54.6
Min nTPM: 26.9
P10809_1016
26.9
P10809_1031
54.6
P10809_1050
32.0
P10809_1069
50.3
P10809_1087
42.0
P10809_1110
40.9
T-reg nTPM: 55.0
Samples: 6
Max nTPM: 71.4
Min nTPM: 41.5
P10809_1018
53.9
P10809_1037
54.5
P10809_1056
50.4
P10809_1075
41.5
P10809_1094
71.4
P10809_1106
58.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 86.5
Samples: 4
Max nTPM: 109.1
Min nTPM: 62.6
RHH5202_R3573
109.1
RHH5230_R3602
62.6
RHH5259_R3631
88.1
RHH5288_R3660
86.2
Effector memory CD8 T-cell nTPM: 87.3
Samples: 4
Max nTPM: 109.1
Min nTPM: 64.1
RHH5203_R3574
109.1
RHH5231_R3603
98.5
RHH5260_R3632
64.1
RHH5289_R3661
77.6
MAIT T-cell nTPM: 74.4
Samples: 4
Max nTPM: 111.5
Min nTPM: 47.8
RHH5233_R3605
78.9
RHH5205_R3576
111.5
RHH5262_R3634
59.2
RHH5297_R3663
47.8
Memory CD4 T-cell TFH nTPM: 82.8
Samples: 4
Max nTPM: 107.3
Min nTPM: 62.7
RHH5300_R3666
62.7
RHH5236_R3608
82.7
RHH5265_R3637
78.3
RHH5208_R3579
107.3
Memory CD4 T-cell Th1 nTPM: 82.2
Samples: 4
Max nTPM: 91.9
Min nTPM: 72.8
RHH5210_R3581
78.1
RHH5302_R3668
72.8
RHH5238_R3610
86.0
RHH5267_R3639
91.9
Memory CD4 T-cell Th1/Th17 nTPM: 86.3
Samples: 4
Max nTPM: 94.6
Min nTPM: 65.3
RHH5303_R3669
91.7
RHH5211_R3582
93.4
RHH5239_R3611
94.6
RHH5268_R3640
65.3
Memory CD4 T-cell Th17 nTPM: 88.0
Samples: 4
Max nTPM: 97.4
Min nTPM: 77.4
RHH5304_R3670
77.4
RHH5212_R3583
82.3
RHH5240_R3612
94.8
RHH5269_R3641
97.4
Memory CD4 T-cell Th2 nTPM: 83.1
Samples: 4
Max nTPM: 93.7
Min nTPM: 64.3
RHH5305_R3671
64.3
RHH5213_R3584
93.7
RHH5241_R3613
82.3
RHH5270_R3642
92.2
Naive CD4 T-cell nTPM: 69.8
Samples: 4
Max nTPM: 95.0
Min nTPM: 57.0
RHH5306_R3672
57.0
RHH5214_R3585
64.5
RHH5242_R3614
62.7
RHH5271_R3643
95.0
Naive CD8 T-cell nTPM: 69.6
Samples: 4
Max nTPM: 80.3
Min nTPM: 59.8
RHH5201_R3572
59.8
RHH5229_R3601
64.3
RHH5258_R3630
74.1
RHH5287_R3659
80.3
Non-Vd2 gdTCR nTPM: 95.1
Samples: 4
Max nTPM: 102.7
Min nTPM: 85.0
RHH5235_R3607
85.0
RHH5264_R3636
102.7
RHH5207_R3578
95.9
RHH5299_R3665
96.6
T-reg nTPM: 91.9
Samples: 4
Max nTPM: 106.3
Min nTPM: 61.8
RHH5301_R3667
61.8
RHH5237_R3609
106.3
RHH5266_R3638
97.9
RHH5209_R3580
101.4
Terminal effector memory CD4 T-cell nTPM: 89.8
Samples: 2
Max nTPM: 103.2
Min nTPM: 76.3
RHH5243_R3615
103.2
RHH5272_R3644
76.3
Terminal effector memory CD8 T-cell nTPM: 86.3
Samples: 4
Max nTPM: 91.5
Min nTPM: 78.1
RHH5232_R3604
90.4
RHH5204_R3575
78.1
RHH5261_R3633
91.5
RHH5296_R3662
85.1
Vd2 gdTCR nTPM: 79.7
Samples: 4
Max nTPM: 94.3
Min nTPM: 64.7
RHH5234_R3606
76.0
RHH5206_R3577
83.7
RHH5263_R3635
94.3
RHH5298_R3664
64.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
