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CABP1
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  • CABP1
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CABP1
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Calcium binding protein 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q24.31
Chromosome location (bp) 120640626 - 120667324
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000157782 (version 109)
Entrez gene 9478
HGNC HGNC:1384
UniProt Q9NZU7 (UniProt - Evidence at protein level)
neXtProt NX_Q9NZU7
GeneCards CABP1
Antibodypedia CABP1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Modulates calcium-dependent activity of inositol 1,4,5-triphosphate receptors (ITPRs)1. Inhibits agonist-induced intracellular calcium signaling 2. Enhances inactivation and does not support calcium-dependent facilitation of voltage-dependent P/Q-type calcium channels 3. Causes calcium-dependent facilitation and inhibits inactivation of L-type calcium channels by binding to the same sites as calmodulin in the C-terminal domain of CACNA1C, but has an opposite effect on channel function 4. Suppresses the calcium-dependent inactivation of CACNA1D (By similarity). Inhibits TRPC5 channels 5. Prevents NMDA receptor-induced cellular degeneration. Required for the normal transfer of light signals through the retina (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Sensory transduction, Vision
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Calcium, Magnesium, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Calcium binding proteins are an important component of calcium mediated cellular signal transduction. This gene encodes a protein that belongs to a subfamily of calcium binding proteins which share similarity to calmodulin. The protein encoded by this gene regulates the gating of voltage-gated calcium ion channels. This protein inhibits calcium-dependent inactivation and supports calcium-dependent facilitation of ion channels containing voltage-dependent L-type calcium channel subunit alpha-1C. This protein also regulates calcium-dependent activity of inositol 1,4,5-triphosphate receptors, P/Q-type voltage-gated calcium channels, and transient receptor potential channel TRPC5. This gene is predominantly expressed in retina and brain. Alternative splicing results in multiple transcript variants encoding disinct isoforms. [provided by RefSeq, Jul 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CABP1-201
ENSP00000288616
ENST00000288616
Q9NZU7
[Direct mapping] Calcium-binding protein 1
Show all
Transporters
   Accessory Factors Involved in Transport
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0004857 [enzyme inhibitor activity]
GO:0005246 [calcium channel regulator activity]
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0007601 [visual perception]
GO:0008139 [nuclear localization sequence binding]
GO:0014069 [postsynaptic density]
GO:0016020 [membrane]
GO:0042308 [negative regulation of protein import into nucleus]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
GO:0048306 [calcium-dependent protein binding]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050896 [response to stimulus]
GO:1901385 [regulation of voltage-gated calcium channel activity]
Show all
227 aa
26 kDa
No 0
CABP1-202
ENSP00000317310
ENST00000316803
Q9NZU7
[Direct mapping] Calcium-binding protein 1
Show all
Transporters
   Accessory Factors Involved in Transport
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0004857 [enzyme inhibitor activity]
GO:0005246 [calcium channel regulator activity]
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0007601 [visual perception]
GO:0008139 [nuclear localization sequence binding]
GO:0014069 [postsynaptic density]
GO:0016020 [membrane]
GO:0042308 [negative regulation of protein import into nucleus]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
GO:0048306 [calcium-dependent protein binding]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050896 [response to stimulus]
GO:1901385 [regulation of voltage-gated calcium channel activity]
Show all
370 aa
39.8 kDa
No 0
CABP1-203
ENSP00000288615
ENST00000351200
Q9NZU7
[Direct mapping] Calcium-binding protein 1
Show all
Transporters
   Accessory Factors Involved in Transport
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0004857 [enzyme inhibitor activity]
GO:0005246 [calcium channel regulator activity]
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0007601 [visual perception]
GO:0008139 [nuclear localization sequence binding]
GO:0014069 [postsynaptic density]
GO:0016020 [membrane]
GO:0042308 [negative regulation of protein import into nucleus]
GO:0045202 [synapse]
GO:0046872 [metal ion binding]
GO:0048306 [calcium-dependent protein binding]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050896 [response to stimulus]
GO:1901385 [regulation of voltage-gated calcium channel activity]
Show all
167 aa
19.4 kDa
No 0
CABP1-204
ENSP00000398959
ENST00000453000
C9J8G2
[Direct mapping] Calcium-binding protein 1
Show all
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Show all
GO:0005509 [calcium ion binding]
GO:0046872 [metal ion binding]
Show all
306 aa
34.3 kDa
Yes 0

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