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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.0
nTPM
Monaco:
60.1
nTPM
Schmiedel:
164.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.0
HPA sample
nTPM
gdT-cell nTPM: 40.1
Samples: 6
Max nTPM: 72.2
Min nTPM: 14.8
P10809_1007
56.5
P10809_1022
54.2
P10809_1041
72.2
P10809_1060
14.8
P10809_1077
26.1
P10809_1098
17.0
MAIT T-cell nTPM: 23.3
Samples: 6
Max nTPM: 43.4
Min nTPM: 3.6
P10809_1006
41.7
P10809_1024
43.4
P10809_1043
11.0
P10809_1062
6.7
P10809_1083
33.4
P10809_1097
3.6
Memory CD4 T-cell nTPM: 47.5
Samples: 6
Max nTPM: 58.3
Min nTPM: 29.0
P10809_1014
58.3
P10809_1026
43.3
P10809_1045
57.2
P10809_1064
55.6
P10809_1086
41.6
P10809_1113
29.0
Memory CD8 T-cell nTPM: 27.1
Samples: 5
Max nTPM: 48.6
Min nTPM: 4.5
P10809_1012
44.5
P10809_1027
25.3
P10809_1046
48.6
P10809_1065
12.5
P10809_1111
4.5
Naive CD4 T-cell nTPM: 51.7
Samples: 6
Max nTPM: 63.4
Min nTPM: 44.0
P10809_1015
63.4
P10809_1030
44.7
P10809_1049
49.7
P10809_1068
47.3
P10809_1085
61.2
P10809_1112
44.0
Naive CD8 T-cell nTPM: 39.5
Samples: 6
Max nTPM: 53.7
Min nTPM: 15.4
P10809_1016
48.9
P10809_1031
15.4
P10809_1050
42.6
P10809_1069
37.6
P10809_1087
53.7
P10809_1110
38.9
T-reg nTPM: 63.0
Samples: 6
Max nTPM: 84.9
Min nTPM: 44.9
P10809_1018
59.4
P10809_1037
69.0
P10809_1056
52.0
P10809_1075
44.9
P10809_1094
67.9
P10809_1106
84.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
60.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.6
Samples: 4
Max nTPM: 72.6
Min nTPM: 14.1
RHH5202_R3573
72.6
RHH5230_R3602
16.4
RHH5259_R3631
14.1
RHH5288_R3660
23.2
Effector memory CD8 T-cell nTPM: 60.1
Samples: 4
Max nTPM: 141.1
Min nTPM: 11.4
RHH5203_R3574
141.1
RHH5231_R3603
44.2
RHH5260_R3632
11.4
RHH5289_R3661
43.8
MAIT T-cell nTPM: 30.5
Samples: 4
Max nTPM: 56.1
Min nTPM: 11.7
RHH5233_R3605
56.1
RHH5205_R3576
28.9
RHH5262_R3634
11.7
RHH5297_R3663
25.1
Memory CD4 T-cell TFH nTPM: 22.7
Samples: 4
Max nTPM: 46.5
Min nTPM: 9.8
RHH5300_R3666
46.5
RHH5236_R3608
22.2
RHH5265_R3637
12.3
RHH5208_R3579
9.8
Memory CD4 T-cell Th1 nTPM: 40.1
Samples: 4
Max nTPM: 83.0
Min nTPM: 10.6
RHH5210_R3581
83.0
RHH5302_R3668
53.9
RHH5238_R3610
10.6
RHH5267_R3639
12.7
Memory CD4 T-cell Th1/Th17 nTPM: 43.7
Samples: 4
Max nTPM: 113.3
Min nTPM: 13.4
RHH5303_R3669
113.3
RHH5211_R3582
33.1
RHH5239_R3611
13.4
RHH5268_R3640
15.1
Memory CD4 T-cell Th17 nTPM: 23.5
Samples: 4
Max nTPM: 34.9
Min nTPM: 13.5
RHH5304_R3670
34.9
RHH5212_R3583
26.1
RHH5240_R3612
19.6
RHH5269_R3641
13.5
Memory CD4 T-cell Th2 nTPM: 43.8
Samples: 4
Max nTPM: 72.8
Min nTPM: 26.5
RHH5305_R3671
33.6
RHH5213_R3584
72.8
RHH5241_R3613
26.5
RHH5270_R3642
42.3
Naive CD4 T-cell nTPM: 36.2
Samples: 4
Max nTPM: 71.8
Min nTPM: 11.3
RHH5306_R3672
38.9
RHH5214_R3585
71.8
RHH5242_R3614
22.7
RHH5271_R3643
11.3
Naive CD8 T-cell nTPM: 46.0
Samples: 4
Max nTPM: 137.0
Min nTPM: 15.0
RHH5201_R3572
137.0
RHH5229_R3601
15.2
RHH5258_R3630
16.8
RHH5287_R3659
15.0
Non-Vd2 gdTCR nTPM: 36.3
Samples: 4
Max nTPM: 105.8
Min nTPM: 9.3
RHH5235_R3607
9.3
RHH5264_R3636
14.3
RHH5207_R3578
105.8
RHH5299_R3665
15.6
T-reg nTPM: 60.0
Samples: 4
Max nTPM: 124.8
Min nTPM: 14.2
RHH5301_R3667
62.1
RHH5237_R3609
124.8
RHH5266_R3638
38.9
RHH5209_R3580
14.2
Terminal effector memory CD4 T-cell nTPM: 15.0
Samples: 2
Max nTPM: 16.5
Min nTPM: 13.5
RHH5243_R3615
13.5
RHH5272_R3644
16.5
Terminal effector memory CD8 T-cell nTPM: 53.6
Samples: 4
Max nTPM: 151.9
Min nTPM: 12.1
RHH5232_R3604
18.0
RHH5204_R3575
32.2
RHH5261_R3633
12.1
RHH5296_R3662
151.9
Vd2 gdTCR nTPM: 31.2
Samples: 4
Max nTPM: 57.5
Min nTPM: 12.4
RHH5234_R3606
57.5
RHH5206_R3577
33.6
RHH5263_R3635
12.4
RHH5298_R3664
21.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
