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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
107.5
nTPM
Monaco:
511.9
nTPM
Schmiedel:
244.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.5
HPA sample
nTPM
gdT-cell nTPM: 23.7
Samples: 6
Max nTPM: 28.7
Min nTPM: 14.9
P10809_1007
24.4
P10809_1022
24.3
P10809_1041
28.5
P10809_1060
14.9
P10809_1077
21.1
P10809_1098
28.7
MAIT T-cell nTPM: 27.2
Samples: 6
Max nTPM: 47.4
Min nTPM: 15.3
P10809_1006
47.4
P10809_1024
15.3
P10809_1043
27.5
P10809_1062
26.5
P10809_1083
17.8
P10809_1097
28.5
Memory CD4 T-cell nTPM: 55.4
Samples: 6
Max nTPM: 74.0
Min nTPM: 31.2
P10809_1014
66.8
P10809_1026
74.0
P10809_1045
68.1
P10809_1064
37.6
P10809_1086
31.2
P10809_1113
54.4
Memory CD8 T-cell nTPM: 43.4
Samples: 5
Max nTPM: 59.8
Min nTPM: 24.5
P10809_1012
59.8
P10809_1027
37.5
P10809_1046
46.4
P10809_1065
24.5
P10809_1111
48.8
Naive CD4 T-cell nTPM: 107.6
Samples: 6
Max nTPM: 134.1
Min nTPM: 80.3
P10809_1015
114.5
P10809_1030
106.7
P10809_1049
85.4
P10809_1068
124.3
P10809_1085
80.3
P10809_1112
134.1
Naive CD8 T-cell nTPM: 90.1
Samples: 6
Max nTPM: 148.8
Min nTPM: 13.2
P10809_1016
148.8
P10809_1031
105.7
P10809_1050
76.9
P10809_1069
65.0
P10809_1087
13.2
P10809_1110
130.9
T-reg nTPM: 49.8
Samples: 6
Max nTPM: 63.1
Min nTPM: 35.0
P10809_1018
44.3
P10809_1037
40.4
P10809_1056
61.4
P10809_1075
63.1
P10809_1094
35.0
P10809_1106
54.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
511.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 244.4
Samples: 4
Max nTPM: 351.9
Min nTPM: 157.9
RHH5202_R3573
157.9
RHH5230_R3602
274.1
RHH5259_R3631
351.9
RHH5288_R3660
193.6
Effector memory CD8 T-cell nTPM: 80.5
Samples: 4
Max nTPM: 120.8
Min nTPM: 47.3
RHH5203_R3574
47.3
RHH5231_R3603
105.0
RHH5260_R3632
120.8
RHH5289_R3661
48.7
MAIT T-cell nTPM: 80.9
Samples: 4
Max nTPM: 112.5
Min nTPM: 46.5
RHH5233_R3605
46.5
RHH5205_R3576
92.2
RHH5262_R3634
112.5
RHH5297_R3663
72.3
Memory CD4 T-cell TFH nTPM: 247.1
Samples: 4
Max nTPM: 274.9
Min nTPM: 214.2
RHH5300_R3666
246.3
RHH5236_R3608
274.9
RHH5265_R3637
252.9
RHH5208_R3579
214.2
Memory CD4 T-cell Th1 nTPM: 280.2
Samples: 4
Max nTPM: 297.0
Min nTPM: 236.2
RHH5210_R3581
290.9
RHH5302_R3668
236.2
RHH5238_R3610
296.8
RHH5267_R3639
297.0
Memory CD4 T-cell Th1/Th17 nTPM: 207.7
Samples: 4
Max nTPM: 261.0
Min nTPM: 127.3
RHH5303_R3669
127.3
RHH5211_R3582
208.0
RHH5239_R3611
261.0
RHH5268_R3640
234.3
Memory CD4 T-cell Th17 nTPM: 183.5
Samples: 4
Max nTPM: 214.4
Min nTPM: 139.2
RHH5304_R3670
139.2
RHH5212_R3583
214.4
RHH5240_R3612
167.9
RHH5269_R3641
212.6
Memory CD4 T-cell Th2 nTPM: 204.1
Samples: 4
Max nTPM: 240.2
Min nTPM: 161.2
RHH5305_R3671
205.7
RHH5213_R3584
240.2
RHH5241_R3613
161.2
RHH5270_R3642
209.3
Naive CD4 T-cell nTPM: 448.0
Samples: 4
Max nTPM: 551.5
Min nTPM: 354.5
RHH5306_R3672
431.6
RHH5214_R3585
354.5
RHH5242_R3614
454.4
RHH5271_R3643
551.5
Naive CD8 T-cell nTPM: 512.0
Samples: 4
Max nTPM: 556.0
Min nTPM: 405.0
RHH5201_R3572
405.0
RHH5229_R3601
538.3
RHH5258_R3630
556.0
RHH5287_R3659
548.5
Non-Vd2 gdTCR nTPM: 75.0
Samples: 4
Max nTPM: 117.2
Min nTPM: 28.8
RHH5235_R3607
117.2
RHH5264_R3636
77.3
RHH5207_R3578
28.8
RHH5299_R3665
76.7
T-reg nTPM: 263.6
Samples: 4
Max nTPM: 281.7
Min nTPM: 238.0
RHH5301_R3667
238.0
RHH5237_R3609
253.4
RHH5266_R3638
281.1
RHH5209_R3580
281.7
Terminal effector memory CD4 T-cell nTPM: 154.3
Samples: 2
Max nTPM: 164.0
Min nTPM: 144.6
RHH5243_R3615
164.0
RHH5272_R3644
144.6
Terminal effector memory CD8 T-cell nTPM: 67.4
Samples: 4
Max nTPM: 115.8
Min nTPM: 44.2
RHH5232_R3604
57.0
RHH5204_R3575
44.2
RHH5261_R3633
115.8
RHH5296_R3662
52.4
Vd2 gdTCR nTPM: 125.2
Samples: 4
Max nTPM: 182.2
Min nTPM: 71.6
RHH5234_R3606
128.1
RHH5206_R3577
71.6
RHH5263_R3635
182.2
RHH5298_R3664
119.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
