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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.7
nTPM
Monaco:
106.4
nTPM
Schmiedel:
35.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.7
HPA sample
nTPM
gdT-cell nTPM: 58.1
Samples: 6
Max nTPM: 74.6
Min nTPM: 43.0
P10809_1007
43.0
P10809_1022
74.6
P10809_1041
59.3
P10809_1060
50.9
P10809_1077
57.8
P10809_1098
62.7
MAIT T-cell nTPM: 64.7
Samples: 6
Max nTPM: 94.6
Min nTPM: 54.7
P10809_1006
55.7
P10809_1024
94.6
P10809_1043
65.0
P10809_1062
54.7
P10809_1083
61.3
P10809_1097
57.0
Memory CD4 T-cell nTPM: 48.8
Samples: 6
Max nTPM: 62.3
Min nTPM: 39.7
P10809_1014
39.7
P10809_1026
51.7
P10809_1045
62.3
P10809_1064
43.7
P10809_1086
51.5
P10809_1113
44.1
Memory CD8 T-cell nTPM: 55.3
Samples: 5
Max nTPM: 70.7
Min nTPM: 41.7
P10809_1012
46.1
P10809_1027
70.7
P10809_1046
62.9
P10809_1065
55.1
P10809_1111
41.7
Naive CD4 T-cell nTPM: 45.9
Samples: 6
Max nTPM: 55.7
Min nTPM: 35.2
P10809_1015
35.2
P10809_1030
50.3
P10809_1049
55.7
P10809_1068
44.6
P10809_1085
49.5
P10809_1112
39.9
Naive CD8 T-cell nTPM: 43.8
Samples: 6
Max nTPM: 51.9
Min nTPM: 35.7
P10809_1016
35.7
P10809_1031
50.3
P10809_1050
47.3
P10809_1069
36.7
P10809_1087
51.9
P10809_1110
40.6
T-reg nTPM: 62.3
Samples: 6
Max nTPM: 88.0
Min nTPM: 37.5
P10809_1018
44.1
P10809_1037
68.2
P10809_1056
37.5
P10809_1075
61.3
P10809_1094
88.0
P10809_1106
74.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
106.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.8
Samples: 4
Max nTPM: 81.5
Min nTPM: 60.5
RHH5202_R3573
81.5
RHH5230_R3602
67.1
RHH5259_R3631
60.5
RHH5288_R3660
78.2
Effector memory CD8 T-cell nTPM: 98.2
Samples: 4
Max nTPM: 128.6
Min nTPM: 81.8
RHH5203_R3574
92.0
RHH5231_R3603
90.5
RHH5260_R3632
81.8
RHH5289_R3661
128.6
MAIT T-cell nTPM: 101.9
Samples: 4
Max nTPM: 113.0
Min nTPM: 93.5
RHH5233_R3605
93.5
RHH5205_R3576
100.1
RHH5262_R3634
113.0
RHH5297_R3663
100.9
Memory CD4 T-cell TFH nTPM: 77.3
Samples: 4
Max nTPM: 82.6
Min nTPM: 68.0
RHH5300_R3666
79.1
RHH5236_R3608
68.0
RHH5265_R3637
79.4
RHH5208_R3579
82.6
Memory CD4 T-cell Th1 nTPM: 58.6
Samples: 4
Max nTPM: 71.1
Min nTPM: 45.5
RHH5210_R3581
64.7
RHH5302_R3668
71.1
RHH5238_R3610
53.2
RHH5267_R3639
45.5
Memory CD4 T-cell Th1/Th17 nTPM: 81.7
Samples: 4
Max nTPM: 104.4
Min nTPM: 62.6
RHH5303_R3669
94.5
RHH5211_R3582
104.4
RHH5239_R3611
62.6
RHH5268_R3640
65.2
Memory CD4 T-cell Th17 nTPM: 73.4
Samples: 4
Max nTPM: 81.5
Min nTPM: 56.6
RHH5304_R3670
80.5
RHH5212_R3583
81.5
RHH5240_R3612
75.0
RHH5269_R3641
56.6
Memory CD4 T-cell Th2 nTPM: 71.3
Samples: 4
Max nTPM: 76.9
Min nTPM: 66.9
RHH5305_R3671
76.9
RHH5213_R3584
73.8
RHH5241_R3613
67.7
RHH5270_R3642
66.9
Naive CD4 T-cell nTPM: 56.8
Samples: 4
Max nTPM: 71.8
Min nTPM: 46.0
RHH5306_R3672
46.0
RHH5214_R3585
56.2
RHH5242_R3614
71.8
RHH5271_R3643
53.2
Naive CD8 T-cell nTPM: 61.0
Samples: 4
Max nTPM: 82.3
Min nTPM: 45.5
RHH5201_R3572
82.3
RHH5229_R3601
45.5
RHH5258_R3630
66.6
RHH5287_R3659
49.5
Non-Vd2 gdTCR nTPM: 96.0
Samples: 4
Max nTPM: 108.4
Min nTPM: 85.2
RHH5235_R3607
85.2
RHH5264_R3636
87.2
RHH5207_R3578
103.2
RHH5299_R3665
108.4
T-reg nTPM: 81.0
Samples: 4
Max nTPM: 100.9
Min nTPM: 70.1
RHH5301_R3667
100.9
RHH5237_R3609
70.1
RHH5266_R3638
75.6
RHH5209_R3580
77.2
Terminal effector memory CD4 T-cell nTPM: 81.0
Samples: 2
Max nTPM: 82.4
Min nTPM: 79.5
RHH5243_R3615
82.4
RHH5272_R3644
79.5
Terminal effector memory CD8 T-cell nTPM: 106.5
Samples: 4
Max nTPM: 116.3
Min nTPM: 85.0
RHH5232_R3604
112.6
RHH5204_R3575
111.9
RHH5261_R3633
85.0
RHH5296_R3662
116.3
Vd2 gdTCR nTPM: 76.9
Samples: 4
Max nTPM: 85.7
Min nTPM: 66.6
RHH5234_R3606
66.6
RHH5206_R3577
85.7
RHH5263_R3635
70.6
RHH5298_R3664
84.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
