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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
45.0
nTPM
Monaco:
169.7
nTPM
Schmiedel:
70.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.0
HPA sample
nTPM
gdT-cell nTPM: 25.3
Samples: 6
Max nTPM: 30.8
Min nTPM: 17.3
P10809_1007
17.3
P10809_1022
29.2
P10809_1041
21.4
P10809_1060
26.1
P10809_1077
27.1
P10809_1098
30.8
MAIT T-cell nTPM: 19.9
Samples: 6
Max nTPM: 23.1
Min nTPM: 16.5
P10809_1006
16.5
P10809_1024
22.0
P10809_1043
17.7
P10809_1062
21.9
P10809_1083
18.0
P10809_1097
23.1
Memory CD4 T-cell nTPM: 22.8
Samples: 6
Max nTPM: 28.9
Min nTPM: 14.5
P10809_1014
23.6
P10809_1026
14.5
P10809_1045
19.5
P10809_1064
21.6
P10809_1086
28.9
P10809_1113
28.5
Memory CD8 T-cell nTPM: 24.7
Samples: 5
Max nTPM: 26.5
Min nTPM: 23.2
P10809_1012
25.1
P10809_1027
23.2
P10809_1046
23.4
P10809_1065
26.5
P10809_1111
25.5
Naive CD4 T-cell nTPM: 18.3
Samples: 6
Max nTPM: 25.2
Min nTPM: 12.3
P10809_1015
19.3
P10809_1030
12.3
P10809_1049
15.2
P10809_1068
16.7
P10809_1085
25.2
P10809_1112
21.1
Naive CD8 T-cell nTPM: 23.3
Samples: 6
Max nTPM: 35.1
Min nTPM: 18.5
P10809_1016
18.9
P10809_1031
21.8
P10809_1050
18.5
P10809_1069
20.0
P10809_1087
35.1
P10809_1110
25.3
T-reg nTPM: 45.0
Samples: 6
Max nTPM: 59.1
Min nTPM: 36.3
P10809_1018
41.0
P10809_1037
41.2
P10809_1056
36.3
P10809_1075
59.1
P10809_1094
49.0
P10809_1106
43.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
169.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 143.7
Samples: 4
Max nTPM: 161.6
Min nTPM: 132.3
RHH5202_R3573
141.4
RHH5230_R3602
161.6
RHH5259_R3631
132.3
RHH5288_R3660
139.3
Effector memory CD8 T-cell nTPM: 165.9
Samples: 4
Max nTPM: 193.1
Min nTPM: 153.1
RHH5203_R3574
153.1
RHH5231_R3603
162.1
RHH5260_R3632
155.4
RHH5289_R3661
193.1
MAIT T-cell nTPM: 119.8
Samples: 4
Max nTPM: 136.2
Min nTPM: 105.7
RHH5233_R3605
136.2
RHH5205_R3576
107.9
RHH5262_R3634
129.3
RHH5297_R3663
105.7
Memory CD4 T-cell TFH nTPM: 150.7
Samples: 4
Max nTPM: 180.3
Min nTPM: 126.4
RHH5300_R3666
135.8
RHH5236_R3608
180.3
RHH5265_R3637
126.4
RHH5208_R3579
160.1
Memory CD4 T-cell Th1 nTPM: 118.2
Samples: 4
Max nTPM: 146.3
Min nTPM: 102.5
RHH5210_R3581
102.5
RHH5302_R3668
117.1
RHH5238_R3610
106.9
RHH5267_R3639
146.3
Memory CD4 T-cell Th1/Th17 nTPM: 130.4
Samples: 4
Max nTPM: 145.1
Min nTPM: 117.1
RHH5303_R3669
130.3
RHH5211_R3582
128.9
RHH5239_R3611
145.1
RHH5268_R3640
117.1
Memory CD4 T-cell Th17 nTPM: 150.4
Samples: 4
Max nTPM: 173.4
Min nTPM: 138.7
RHH5304_R3670
138.7
RHH5212_R3583
140.3
RHH5240_R3612
173.4
RHH5269_R3641
149.3
Memory CD4 T-cell Th2 nTPM: 123.0
Samples: 4
Max nTPM: 133.0
Min nTPM: 114.2
RHH5305_R3671
122.6
RHH5213_R3584
122.0
RHH5241_R3613
133.0
RHH5270_R3642
114.2
Naive CD4 T-cell nTPM: 104.3
Samples: 4
Max nTPM: 113.5
Min nTPM: 91.8
RHH5306_R3672
98.8
RHH5214_R3585
113.2
RHH5242_R3614
91.8
RHH5271_R3643
113.5
Naive CD8 T-cell nTPM: 108.4
Samples: 4
Max nTPM: 139.1
Min nTPM: 81.2
RHH5201_R3572
139.1
RHH5229_R3601
81.2
RHH5258_R3630
106.2
RHH5287_R3659
107.0
Non-Vd2 gdTCR nTPM: 157.4
Samples: 4
Max nTPM: 187.5
Min nTPM: 126.4
RHH5235_R3607
166.2
RHH5264_R3636
149.4
RHH5207_R3578
187.5
RHH5299_R3665
126.4
T-reg nTPM: 146.6
Samples: 4
Max nTPM: 174.7
Min nTPM: 110.3
RHH5301_R3667
110.3
RHH5237_R3609
174.7
RHH5266_R3638
148.8
RHH5209_R3580
152.5
Terminal effector memory CD4 T-cell nTPM: 169.7
Samples: 2
Max nTPM: 181.5
Min nTPM: 157.9
RHH5243_R3615
181.5
RHH5272_R3644
157.9
Terminal effector memory CD8 T-cell nTPM: 139.1
Samples: 4
Max nTPM: 155.4
Min nTPM: 122.9
RHH5232_R3604
133.1
RHH5204_R3575
122.9
RHH5261_R3633
144.9
RHH5296_R3662
155.4
Vd2 gdTCR nTPM: 158.1
Samples: 4
Max nTPM: 206.3
Min nTPM: 124.1
RHH5234_R3606
158.4
RHH5206_R3577
143.7
RHH5263_R3635
206.3
RHH5298_R3664
124.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
