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SHROOM4
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                                  • SHROOM4
                                  PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
                                  GENERAL INFORMATIONi

                                  General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

                                  Gene namei

                                  Official gene symbol, which is typically a short form of the gene name, according to HGNC.

                                  SHROOM4
                                  Synonyms KIAA1202
                                  Gene descriptioni

                                  Full gene name according to HGNC.

                                  Shroom family member 4
                                  Protein classi

                                  Assigned HPA protein class(es) for the encoded protein(s).

                                  Disease related genes
                                  Human disease related genes
                                  Predicted locationi

                                  All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

                                  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

                                  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

                                  The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

                                  Intracellular
                                  Protein evidence Evidence at protein level (all genes)
                                  GENE INFORMATIONi

                                  Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

                                  Chromosome X
                                  Cytoband p11.22
                                  Chromosome location (bp) 50586796 - 50814302
                                  Number of transcriptsi

                                  Number of protein-coding transcripts from the gene as defined by Ensembl.

                                  3
                                  Ensembl ENSG00000158352 (version 109)
                                  Entrez gene 57477
                                  HGNC HGNC:29215
                                  UniProt Q9ULL8 (UniProt - Evidence at protein level)
                                  neXtProt NX_Q9ULL8
                                  GeneCards SHROOM4
                                  Antibodypedia SHROOM4 antibodies


                                  PROTEIN FUNCTION
                                  Protein function (UniProt)i

                                  Useful information about the protein provided by UniProt.

                                  Probable regulator of cytoskeletal architecture that plays an important role in development. May regulate cellular and cytoskeletal architecture by modulating the spatial distribution of myosin II (By similarity).... show less
                                  Molecular function (UniProt)i

                                  Keywords assigned by UniProt to proteins due to their particular molecular function.

                                  Actin-binding, Developmental protein
                                  Gene summary (Entrez)i

                                  Useful information about the gene from Entrez

                                  This gene encodes a member of the APX/Shroom family, which contain an N-terminal PDZ domain and a C-terminal ASD2 motif. The encoded protein may play a role in cytoskeletal architecture. Mutations in this gene have been linked to the X-linked Stocco dos Santos syndrome characterized by cognitive disabilities. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jul 2017]... show less
                                  PROTEIN INFORMATIONi

                                  The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

                                  The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

                                  The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

                                  The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
                                  Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
                                  (predicted)
                                  Transmembrane regions
                                  (predicted)
                                  SHROOM4-201
                                  ENSP00000289292
                                  ENST00000289292
                                  Q9ULL8
                                  [Direct mapping] Protein Shroom4
                                  Show all
                                  Predicted intracellular proteins
                                     Intracellular proteins predicted by MDM and MDSEC
                                  Disease related genes
                                  Human disease related genes
                                     Congenital malformations
                                     Other congenital malformations
                                  Mapped to neXtProt
                                     neXtProt - Evidence at protein level
                                  Protein evidence (Ezkurdia et al 2014)
                                  Show all
                                  GO:0001725 [stress fiber]
                                  GO:0003779 [actin binding]
                                  GO:0005515 [protein binding]
                                  GO:0005654 [nucleoplasm]
                                  GO:0005737 [cytoplasm]
                                  GO:0005856 [cytoskeleton]
                                  GO:0005884 [actin filament]
                                  GO:0005912 [adherens junction]
                                  GO:0005925 [focal adhesion]
                                  GO:0007015 [actin filament organization]
                                  GO:0007420 [brain development]
                                  GO:0009898 [cytoplasmic side of plasma membrane]
                                  GO:0009925 [basal plasma membrane]
                                  GO:0015629 [actin cytoskeleton]
                                  GO:0016324 [apical plasma membrane]
                                  GO:0030036 [actin cytoskeleton organization]
                                  GO:0030864 [cortical actin cytoskeleton]
                                  GO:0043231 [intracellular membrane-bounded organelle]
                                  GO:0043296 [apical junction complex]
                                  GO:0045159 [myosin II binding]
                                  GO:0050890 [cognition]
                                  GO:0051015 [actin filament binding]
                                  Show all
                                  1493 aa
                                  164.9 kDa
                                  No 0
                                  SHROOM4-202
                                  ENSP00000365188
                                  ENST00000376020
                                  Q9ULL8
                                  [Direct mapping] Protein Shroom4
                                  Show all
                                  Predicted intracellular proteins
                                     Intracellular proteins predicted by MDM and MDSEC
                                  Disease related genes
                                  Human disease related genes
                                     Congenital malformations
                                     Other congenital malformations
                                  Mapped to neXtProt
                                     neXtProt - Evidence at protein level
                                  Protein evidence (Kim et al 2014)
                                  Protein evidence (Ezkurdia et al 2014)
                                  Show all
                                  GO:0001725 [stress fiber]
                                  GO:0003779 [actin binding]
                                  GO:0005515 [protein binding]
                                  GO:0005654 [nucleoplasm]
                                  GO:0005737 [cytoplasm]
                                  GO:0005856 [cytoskeleton]
                                  GO:0005884 [actin filament]
                                  GO:0005912 [adherens junction]
                                  GO:0005925 [focal adhesion]
                                  GO:0007015 [actin filament organization]
                                  GO:0007420 [brain development]
                                  GO:0009898 [cytoplasmic side of plasma membrane]
                                  GO:0009925 [basal plasma membrane]
                                  GO:0015629 [actin cytoskeleton]
                                  GO:0016324 [apical plasma membrane]
                                  GO:0030036 [actin cytoskeleton organization]
                                  GO:0030864 [cortical actin cytoskeleton]
                                  GO:0043231 [intracellular membrane-bounded organelle]
                                  GO:0043296 [apical junction complex]
                                  GO:0045159 [myosin II binding]
                                  GO:0050890 [cognition]
                                  GO:0051015 [actin filament binding]
                                  Show all
                                  1493 aa
                                  164.9 kDa
                                  No 0
                                  SHROOM4-203
                                  ENSP00000421450
                                  ENST00000460112
                                  Q9ULL8
                                  [Direct mapping] Protein Shroom4
                                  Show all
                                  Predicted intracellular proteins
                                     Intracellular proteins predicted by MDM and MDSEC
                                  Disease related genes
                                  Human disease related genes
                                     Congenital malformations
                                     Other congenital malformations
                                  Mapped to neXtProt
                                     neXtProt - Evidence at protein level
                                  Protein evidence (Ezkurdia et al 2014)
                                  Show all
                                  GO:0001725 [stress fiber]
                                  GO:0003779 [actin binding]
                                  GO:0005654 [nucleoplasm]
                                  GO:0005737 [cytoplasm]
                                  GO:0005856 [cytoskeleton]
                                  GO:0005884 [actin filament]
                                  GO:0005912 [adherens junction]
                                  GO:0005925 [focal adhesion]
                                  GO:0007015 [actin filament organization]
                                  GO:0007420 [brain development]
                                  GO:0009898 [cytoplasmic side of plasma membrane]
                                  GO:0009925 [basal plasma membrane]
                                  GO:0015629 [actin cytoskeleton]
                                  GO:0016324 [apical plasma membrane]
                                  GO:0030036 [actin cytoskeleton organization]
                                  GO:0030864 [cortical actin cytoskeleton]
                                  GO:0043231 [intracellular membrane-bounded organelle]
                                  GO:0043296 [apical junction complex]
                                  GO:0045159 [myosin II binding]
                                  GO:0050890 [cognition]
                                  GO:0051015 [actin filament binding]
                                  Show all
                                  1377 aa
                                  152.2 kDa
                                  No 0

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