We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.7
nTPM
Monaco:
60.5
nTPM
Schmiedel:
136.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.7
HPA sample
nTPM
gdT-cell nTPM: 36.3
Samples: 6
Max nTPM: 41.1
Min nTPM: 25.8
P10809_1007
25.8
P10809_1022
40.1
P10809_1041
41.1
P10809_1060
36.0
P10809_1077
36.3
P10809_1098
38.6
MAIT T-cell nTPM: 30.0
Samples: 6
Max nTPM: 35.0
Min nTPM: 24.8
P10809_1006
24.8
P10809_1024
34.5
P10809_1043
29.0
P10809_1062
31.3
P10809_1083
35.0
P10809_1097
25.6
Memory CD4 T-cell nTPM: 34.1
Samples: 6
Max nTPM: 37.6
Min nTPM: 23.6
P10809_1014
23.6
P10809_1026
37.4
P10809_1045
37.6
P10809_1064
36.2
P10809_1086
36.1
P10809_1113
33.4
Memory CD8 T-cell nTPM: 33.6
Samples: 5
Max nTPM: 40.5
Min nTPM: 22.4
P10809_1012
22.4
P10809_1027
40.5
P10809_1046
35.1
P10809_1065
39.6
P10809_1111
30.2
Naive CD4 T-cell nTPM: 42.7
Samples: 6
Max nTPM: 61.9
Min nTPM: 23.5
P10809_1015
23.5
P10809_1030
45.8
P10809_1049
61.9
P10809_1068
41.2
P10809_1085
45.2
P10809_1112
38.4
Naive CD8 T-cell nTPM: 32.3
Samples: 6
Max nTPM: 36.1
Min nTPM: 22.5
P10809_1016
22.5
P10809_1031
34.2
P10809_1050
35.8
P10809_1069
31.3
P10809_1087
36.1
P10809_1110
33.9
T-reg nTPM: 40.9
Samples: 6
Max nTPM: 71.0
Min nTPM: 25.6
P10809_1018
25.6
P10809_1037
38.8
P10809_1056
71.0
P10809_1075
36.3
P10809_1094
37.8
P10809_1106
35.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
60.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 47.9
Samples: 4
Max nTPM: 58.9
Min nTPM: 37.5
RHH5202_R3573
58.9
RHH5230_R3602
45.1
RHH5259_R3631
37.5
RHH5288_R3660
50.2
Effector memory CD8 T-cell nTPM: 55.3
Samples: 4
Max nTPM: 69.8
Min nTPM: 43.7
RHH5203_R3574
47.3
RHH5231_R3603
60.3
RHH5260_R3632
43.7
RHH5289_R3661
69.8
MAIT T-cell nTPM: 46.7
Samples: 4
Max nTPM: 52.5
Min nTPM: 38.7
RHH5233_R3605
44.3
RHH5205_R3576
38.7
RHH5262_R3634
51.3
RHH5297_R3663
52.5
Memory CD4 T-cell TFH nTPM: 56.5
Samples: 4
Max nTPM: 66.0
Min nTPM: 45.0
RHH5300_R3666
45.0
RHH5236_R3608
57.4
RHH5265_R3637
57.4
RHH5208_R3579
66.0
Memory CD4 T-cell Th1 nTPM: 46.3
Samples: 4
Max nTPM: 61.6
Min nTPM: 24.3
RHH5210_R3581
56.1
RHH5302_R3668
61.6
RHH5238_R3610
24.3
RHH5267_R3639
43.0
Memory CD4 T-cell Th1/Th17 nTPM: 49.9
Samples: 4
Max nTPM: 70.5
Min nTPM: 35.4
RHH5303_R3669
70.5
RHH5211_R3582
58.0
RHH5239_R3611
35.4
RHH5268_R3640
35.7
Memory CD4 T-cell Th17 nTPM: 48.2
Samples: 4
Max nTPM: 53.4
Min nTPM: 37.7
RHH5304_R3670
49.5
RHH5212_R3583
53.4
RHH5240_R3612
52.1
RHH5269_R3641
37.7
Memory CD4 T-cell Th2 nTPM: 57.7
Samples: 4
Max nTPM: 62.2
Min nTPM: 47.1
RHH5305_R3671
62.2
RHH5213_R3584
59.7
RHH5241_R3613
61.6
RHH5270_R3642
47.1
Naive CD4 T-cell nTPM: 59.6
Samples: 4
Max nTPM: 72.5
Min nTPM: 52.0
RHH5306_R3672
57.6
RHH5214_R3585
72.5
RHH5242_R3614
56.2
RHH5271_R3643
52.0
Naive CD8 T-cell nTPM: 60.5
Samples: 4
Max nTPM: 75.9
Min nTPM: 37.6
RHH5201_R3572
75.9
RHH5229_R3601
37.6
RHH5258_R3630
69.3
RHH5287_R3659
59.3
Non-Vd2 gdTCR nTPM: 55.2
Samples: 4
Max nTPM: 69.4
Min nTPM: 33.5
RHH5235_R3607
33.5
RHH5264_R3636
69.4
RHH5207_R3578
63.7
RHH5299_R3665
54.1
T-reg nTPM: 55.8
Samples: 4
Max nTPM: 72.8
Min nTPM: 48.0
RHH5301_R3667
52.6
RHH5237_R3609
72.8
RHH5266_R3638
48.0
RHH5209_R3580
49.6
Terminal effector memory CD4 T-cell nTPM: 53.8
Samples: 2
Max nTPM: 61.0
Min nTPM: 46.6
RHH5243_R3615
46.6
RHH5272_R3644
61.0
Terminal effector memory CD8 T-cell nTPM: 59.7
Samples: 4
Max nTPM: 67.0
Min nTPM: 42.8
RHH5232_R3604
67.0
RHH5204_R3575
62.6
RHH5261_R3633
42.8
RHH5296_R3662
66.3
Vd2 gdTCR nTPM: 56.4
Samples: 4
Max nTPM: 66.3
Min nTPM: 50.3
RHH5234_R3606
50.3
RHH5206_R3577
66.3
RHH5263_R3635
52.3
RHH5298_R3664
56.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
