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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.8
nTPM
Monaco:
73.3
nTPM
Schmiedel:
72.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.8
HPA sample
nTPM
gdT-cell nTPM: 49.3
Samples: 6
Max nTPM: 69.8
Min nTPM: 38.0
P10809_1007
41.7
P10809_1022
49.3
P10809_1041
69.8
P10809_1060
45.5
P10809_1077
51.3
P10809_1098
38.0
MAIT T-cell nTPM: 42.7
Samples: 6
Max nTPM: 56.3
Min nTPM: 29.7
P10809_1006
36.5
P10809_1024
32.0
P10809_1043
56.3
P10809_1062
29.7
P10809_1083
47.4
P10809_1097
54.0
Memory CD4 T-cell nTPM: 44.3
Samples: 6
Max nTPM: 55.3
Min nTPM: 35.8
P10809_1014
41.8
P10809_1026
45.9
P10809_1045
55.3
P10809_1064
45.1
P10809_1086
42.1
P10809_1113
35.8
Memory CD8 T-cell nTPM: 48.0
Samples: 5
Max nTPM: 63.4
Min nTPM: 34.3
P10809_1012
40.1
P10809_1027
48.0
P10809_1046
54.1
P10809_1065
34.3
P10809_1111
63.4
Naive CD4 T-cell nTPM: 40.0
Samples: 6
Max nTPM: 61.1
Min nTPM: 27.0
P10809_1015
27.0
P10809_1030
42.8
P10809_1049
61.1
P10809_1068
35.5
P10809_1085
40.1
P10809_1112
33.5
Naive CD8 T-cell nTPM: 49.1
Samples: 6
Max nTPM: 77.8
Min nTPM: 29.9
P10809_1016
29.9
P10809_1031
77.8
P10809_1050
47.8
P10809_1069
50.6
P10809_1087
36.6
P10809_1110
51.7
T-reg nTPM: 51.8
Samples: 6
Max nTPM: 74.2
Min nTPM: 29.9
P10809_1018
29.9
P10809_1037
64.1
P10809_1056
74.2
P10809_1075
40.7
P10809_1094
61.7
P10809_1106
40.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.5
Samples: 4
Max nTPM: 68.1
Min nTPM: 46.6
RHH5202_R3573
64.1
RHH5230_R3602
59.3
RHH5259_R3631
46.6
RHH5288_R3660
68.1
Effector memory CD8 T-cell nTPM: 71.5
Samples: 4
Max nTPM: 104.8
Min nTPM: 51.1
RHH5203_R3574
78.0
RHH5231_R3603
104.8
RHH5260_R3632
51.1
RHH5289_R3661
51.9
MAIT T-cell nTPM: 53.8
Samples: 4
Max nTPM: 71.8
Min nTPM: 35.1
RHH5233_R3605
44.0
RHH5205_R3576
35.1
RHH5262_R3634
64.1
RHH5297_R3663
71.8
Memory CD4 T-cell TFH nTPM: 70.2
Samples: 4
Max nTPM: 94.8
Min nTPM: 44.8
RHH5300_R3666
78.0
RHH5236_R3608
94.8
RHH5265_R3637
63.1
RHH5208_R3579
44.8
Memory CD4 T-cell Th1 nTPM: 57.2
Samples: 4
Max nTPM: 80.2
Min nTPM: 40.3
RHH5210_R3581
57.3
RHH5302_R3668
80.2
RHH5238_R3610
50.8
RHH5267_R3639
40.3
Memory CD4 T-cell Th1/Th17 nTPM: 57.5
Samples: 4
Max nTPM: 81.8
Min nTPM: 37.2
RHH5303_R3669
81.8
RHH5211_R3582
53.3
RHH5239_R3611
37.2
RHH5268_R3640
57.6
Memory CD4 T-cell Th17 nTPM: 51.4
Samples: 4
Max nTPM: 61.2
Min nTPM: 39.1
RHH5304_R3670
46.5
RHH5212_R3583
61.2
RHH5240_R3612
39.1
RHH5269_R3641
58.8
Memory CD4 T-cell Th2 nTPM: 65.9
Samples: 4
Max nTPM: 84.3
Min nTPM: 56.1
RHH5305_R3671
66.1
RHH5213_R3584
84.3
RHH5241_R3613
56.1
RHH5270_R3642
57.1
Naive CD4 T-cell nTPM: 67.1
Samples: 4
Max nTPM: 84.1
Min nTPM: 52.9
RHH5306_R3672
75.2
RHH5214_R3585
84.1
RHH5242_R3614
52.9
RHH5271_R3643
56.2
Naive CD8 T-cell nTPM: 73.3
Samples: 4
Max nTPM: 95.1
Min nTPM: 44.7
RHH5201_R3572
79.0
RHH5229_R3601
44.7
RHH5258_R3630
74.3
RHH5287_R3659
95.1
Non-Vd2 gdTCR nTPM: 69.8
Samples: 4
Max nTPM: 108.3
Min nTPM: 31.0
RHH5235_R3607
31.0
RHH5264_R3636
80.3
RHH5207_R3578
59.6
RHH5299_R3665
108.3
T-reg nTPM: 54.7
Samples: 4
Max nTPM: 68.7
Min nTPM: 38.8
RHH5301_R3667
56.7
RHH5237_R3609
68.7
RHH5266_R3638
38.8
RHH5209_R3580
54.4
Terminal effector memory CD4 T-cell nTPM: 54.9
Samples: 2
Max nTPM: 58.5
Min nTPM: 51.3
RHH5243_R3615
58.5
RHH5272_R3644
51.3
Terminal effector memory CD8 T-cell nTPM: 63.7
Samples: 4
Max nTPM: 70.0
Min nTPM: 56.6
RHH5232_R3604
56.6
RHH5204_R3575
65.6
RHH5261_R3633
62.5
RHH5296_R3662
70.0
Vd2 gdTCR nTPM: 60.0
Samples: 4
Max nTPM: 86.0
Min nTPM: 38.3
RHH5234_R3606
49.3
RHH5206_R3577
66.3
RHH5263_R3635
38.3
RHH5298_R3664
86.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
