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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
102.9
nTPM
Monaco:
187.4
nTPM
Schmiedel:
209.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.9
HPA sample
nTPM
gdT-cell nTPM: 84.8
Samples: 6
Max nTPM: 129.8
Min nTPM: 63.8
P10809_1007
63.8
P10809_1022
74.0
P10809_1041
88.9
P10809_1060
80.2
P10809_1077
72.0
P10809_1098
129.8
MAIT T-cell nTPM: 102.9
Samples: 6
Max nTPM: 114.0
Min nTPM: 86.4
P10809_1006
89.7
P10809_1024
114.0
P10809_1043
109.7
P10809_1062
111.2
P10809_1083
86.4
P10809_1097
106.4
Memory CD4 T-cell nTPM: 84.7
Samples: 6
Max nTPM: 115.1
Min nTPM: 63.4
P10809_1014
72.6
P10809_1026
86.4
P10809_1045
63.4
P10809_1064
75.6
P10809_1086
94.9
P10809_1113
115.1
Memory CD8 T-cell nTPM: 81.6
Samples: 5
Max nTPM: 98.2
Min nTPM: 57.6
P10809_1012
73.7
P10809_1027
85.4
P10809_1046
57.6
P10809_1065
93.1
P10809_1111
98.2
Naive CD4 T-cell nTPM: 69.2
Samples: 6
Max nTPM: 91.9
Min nTPM: 51.9
P10809_1015
62.5
P10809_1030
73.6
P10809_1049
51.9
P10809_1068
70.7
P10809_1085
64.5
P10809_1112
91.9
Naive CD8 T-cell nTPM: 77.5
Samples: 6
Max nTPM: 95.8
Min nTPM: 64.5
P10809_1016
66.7
P10809_1031
73.1
P10809_1050
64.5
P10809_1069
80.3
P10809_1087
95.8
P10809_1110
84.6
T-reg nTPM: 78.9
Samples: 6
Max nTPM: 97.4
Min nTPM: 61.3
P10809_1018
72.3
P10809_1037
61.3
P10809_1056
84.8
P10809_1075
66.5
P10809_1094
91.3
P10809_1106
97.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
187.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 171.3
Samples: 4
Max nTPM: 180.5
Min nTPM: 156.9
RHH5202_R3573
156.9
RHH5230_R3602
174.0
RHH5259_R3631
180.5
RHH5288_R3660
173.7
Effector memory CD8 T-cell nTPM: 171.4
Samples: 4
Max nTPM: 206.3
Min nTPM: 139.8
RHH5203_R3574
152.9
RHH5231_R3603
186.4
RHH5260_R3632
206.3
RHH5289_R3661
139.8
MAIT T-cell nTPM: 175.4
Samples: 4
Max nTPM: 201.5
Min nTPM: 137.7
RHH5233_R3605
137.7
RHH5205_R3576
193.3
RHH5262_R3634
201.5
RHH5297_R3663
168.9
Memory CD4 T-cell TFH nTPM: 159.5
Samples: 4
Max nTPM: 188.8
Min nTPM: 131.0
RHH5300_R3666
131.0
RHH5236_R3608
188.8
RHH5265_R3637
149.5
RHH5208_R3579
168.7
Memory CD4 T-cell Th1 nTPM: 154.3
Samples: 4
Max nTPM: 194.0
Min nTPM: 135.0
RHH5210_R3581
135.1
RHH5302_R3668
153.1
RHH5238_R3610
135.0
RHH5267_R3639
194.0
Memory CD4 T-cell Th1/Th17 nTPM: 177.2
Samples: 4
Max nTPM: 224.3
Min nTPM: 119.6
RHH5303_R3669
182.5
RHH5211_R3582
224.3
RHH5239_R3611
119.6
RHH5268_R3640
182.3
Memory CD4 T-cell Th17 nTPM: 162.3
Samples: 4
Max nTPM: 173.6
Min nTPM: 145.8
RHH5304_R3670
145.8
RHH5212_R3583
173.6
RHH5240_R3612
160.8
RHH5269_R3641
168.8
Memory CD4 T-cell Th2 nTPM: 168.5
Samples: 4
Max nTPM: 177.6
Min nTPM: 159.4
RHH5305_R3671
159.4
RHH5213_R3584
164.4
RHH5241_R3613
172.4
RHH5270_R3642
177.6
Naive CD4 T-cell nTPM: 144.6
Samples: 4
Max nTPM: 165.5
Min nTPM: 119.9
RHH5306_R3672
119.9
RHH5214_R3585
165.5
RHH5242_R3614
136.2
RHH5271_R3643
156.6
Naive CD8 T-cell nTPM: 144.3
Samples: 4
Max nTPM: 159.5
Min nTPM: 133.6
RHH5201_R3572
159.5
RHH5229_R3601
140.7
RHH5258_R3630
143.3
RHH5287_R3659
133.6
Non-Vd2 gdTCR nTPM: 151.6
Samples: 4
Max nTPM: 190.4
Min nTPM: 131.7
RHH5235_R3607
137.3
RHH5264_R3636
190.4
RHH5207_R3578
146.9
RHH5299_R3665
131.7
T-reg nTPM: 158.6
Samples: 4
Max nTPM: 170.8
Min nTPM: 148.6
RHH5301_R3667
149.9
RHH5237_R3609
148.6
RHH5266_R3638
170.8
RHH5209_R3580
165.2
Terminal effector memory CD4 T-cell nTPM: 158.1
Samples: 2
Max nTPM: 180.6
Min nTPM: 135.5
RHH5243_R3615
135.5
RHH5272_R3644
180.6
Terminal effector memory CD8 T-cell nTPM: 149.6
Samples: 4
Max nTPM: 164.0
Min nTPM: 138.0
RHH5232_R3604
144.9
RHH5204_R3575
151.5
RHH5261_R3633
164.0
RHH5296_R3662
138.0
Vd2 gdTCR nTPM: 187.4
Samples: 4
Max nTPM: 239.3
Min nTPM: 164.0
RHH5234_R3606
164.0
RHH5206_R3577
179.7
RHH5263_R3635
239.3
RHH5298_R3664
166.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
