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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
225.4
nTPM
FANTOM5:
281.5
Scaled Tags Per Million
Pig:
70.2
nTPM
Allen mouse:
6.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
225.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 106.0
1984
Male, age 76, both hemispheres
139.0
2301
Female, age 85, both hemispheres
127.5
2188
Female, age 91, both hemispheres
80.9
2090
Male, age 80, both hemispheres
76.8
Dorsal cochlear nucleus nTPM: 113.7
2058
Male, age 76, both hemispheres
135.7
2187
Female, age 91, both hemispheres
124.8
2370
Male, age 61, both hemispheres
116.7
2802
Male, age 74, right hemisphere
108.9
2378
Male, age 80, both hemispheres
82.1
Dorsal tegmental nucleus nTPM: 128.1
2083
Male, age 80, both hemispheres
143.9
2358
Male, age 61, both hemispheres
142.8
1936
Male, age 76, left hemisphere
130.2
2326
Male, age 74, both hemispheres
95.4
Dorsolateral tegmental area nTPM: 113.2
2141
Male, age 76, both hemispheres
164.4
2654
Male, age 80, both hemispheres
136.0
2751
Female, age 85, both hemispheres
109.5
2360
Male, age 74, both hemispheres
95.1
2337
Male, age 61, both hemispheres
60.8
Kolliker-Fuse nucleus nTPM: 135.4
2163
Male, age 80, both hemispheres
159.9
2793
Female, age 91, left hemisphere
142.0
2315
Male, age 76, right hemisphere
104.2
Lateral lemniscal nuclei nTPM: 197.6
2169
Male, age 76, both hemispheres
248.3
2453
Male, age 74, right hemisphere
215.3
2746
Female, age 85, left hemisphere
193.5
2036
Male, age 80, both hemispheres
185.5
2320
Female, age 91, left hemisphere
145.4
Lateral parabrachial nucleus nTPM: 130.7
2139
Female, age 85, right hemisphere
214.5
2790
Male, age 61, both hemispheres
130.3
2013
Male, age 80, both hemispheres
119.4
2792
Male, age 76, both hemispheres
58.5
Lateral vestibular nucleus nTPM: 152.8
2184
Male, age 76, both hemispheres
182.0
2311
Male, age 80, both hemispheres
123.6
Locus coeruleus nTPM: 197.1
2720
Male, age 74, both hemispheres
233.2
2123
Female, age 91, both hemispheres
226.8
2317
Female, age 72, unknown
194.9
2014
Male, age 55, unknown
194.1
1980
Male, age 76, both hemispheres
190.8
2162
Male, age 80, both hemispheres
177.7
2788
Male, age 74, unknown
162.2
Medial parabrachial nucleus nTPM: 136.4
2854
Male, age 80, both hemispheres
154.3
2156
Male, age 61, both hemispheres
152.5
2786
Male, age 76, both hemispheres
144.6
2170
Female, age 91, both hemispheres
115.8
2463
Female, age 85, right hemisphere
114.8
Medial periolivary nuclei nTPM: 178.1
2171
Female, age 85, both hemispheres
272.8
2063
Male, age 76, both hemispheres
250.4
2791
Male, age 74, right hemisphere
136.5
2458
Female, age 91, both hemispheres
130.3
2081
Male, age 80, both hemispheres
100.5
Motor facial nucleus nTPM: 199.0
2062
Male, age 76, both hemispheres
287.0
2327
Male, age 80, both hemispheres
218.9
2697
Female, age 85, both hemispheres
207.2
2795
Female, age 91, both hemispheres
192.9
2365
Male, age 74, right hemisphere
167.2
2126
Male, age 61, both hemispheres
121.0
Motor trigeminal nucleus nTPM: 155.3
2560
Male, age 74, both hemispheres
169.0
2079
Male, age 80, both hemispheres
168.5
2309
Male, age 76, both hemispheres
160.4
2335
Male, age 61, both hemispheres
149.1
2321
Female, age 91, both hemispheres
129.3
Nuclei of the trapezoid body nTPM: 225.4
2735
Female, age 85, both hemispheres
288.1
2159
Male, age 61, both hemispheres
257.9
1983
Male, age 76, both hemispheres
251.2
2368
Female, age 91, both hemispheres
170.7
2166
Male, age 80, both hemispheres
159.2
Nucleus raphe magnus nTPM: 223.8
2172
Female, age 85, both hemispheres
312.0
2160
Male, age 61, both hemispheres
273.9
2455
Male, age 74, both hemispheres
223.9
2328
Male, age 80, both hemispheres
199.5
2051
Male, age 76, both hemispheres
182.8
2459
Female, age 91, both hemispheres
150.8
Paramedian reticular nucleus nTPM: 152.3
2050
Female, age 85, both hemispheres
201.2
2313
Male, age 61, both hemispheres
175.7
2057
Male, age 80, both hemispheres
143.9
2052
Male, age 76, both hemispheres
88.4
Pedunculopontine tegmental nucleus nTPM: 129.4
2334
Male, age 80, both hemispheres
144.3
1921
Female, age 85, both hemispheres
142.2
2338
Male, age 61, both hemispheres
101.7
Pontine nuclei nTPM: 190.9
2787
Female, age 85, both hemispheres
331.8
1968
Male, age 76, left hemisphere
246.7
1863
Male, age 55, unknown
221.8
2727
Male, age 61, right hemisphere
208.8
2109
Female, age 72, unknown
181.6
2115
Male, age 80, left hemisphere
138.1
2454
Male, age 74, left hemisphere
109.3
2319
Female, age 91, both hemispheres
89.5
Pontine raphe nucleus nTPM: 188.0
2122
Female, age 85, midline
207.0
2853
Male, age 76, midline
169.1
Posteroventral cochlear nucleus nTPM: 94.5
2752
Female, age 85, both hemispheres
172.1
2070
Male, age 76, both hemispheres
133.9
2371
Male, age 61, both hemispheres
102.7
2341
Male, age 80, both hemispheres
45.3
2135
Female, age 91, both hemispheres
18.8
Principal sensory trigeminal nucleus nTPM: 181.6
2158
Male, age 61, both hemispheres
257.1
2008
Male, age 80, left hemisphere
188.8
2324
Male, age 76, both hemispheres
168.1
2367
Female, age 91, left hemisphere
112.2
Reticular pontine nucleus, caudal nTPM: 159.8
2332
Male, age 80, right hemisphere
218.7
2092
Male, age 76, both hemispheres
189.8
2457
Female, age 91, both hemispheres
131.7
2559
Male, age 74, both hemispheres
99.2
Reticular pontine nucleus, oral nTPM: 134.0
2012
Female, age 85, both hemispheres
170.5
2167
Male, age 76, both hemispheres
142.3
2361
Male, age 74, both hemispheres
128.2
1939
Male, age 80, both hemispheres
117.7
2366
Female, age 91, both hemispheres
111.1
Reticulotegmental nucleus nTPM: 158.4
2325
Male, age 76, both hemispheres
211.5
2452
Male, age 74, both hemispheres
149.1
2333
Male, age 80, both hemispheres
144.5
2322
Female, age 91, both hemispheres
128.4
Spinal trigeminal nucleus, oral nTPM: 166.8
1978
Male, age 76, both hemispheres
186.3
2737
Female, age 85, both hemispheres
157.9
2164
Male, age 80, both hemispheres
156.0
Subcoeruleus area nTPM: 153.2
2089
Male, age 76, left hemisphere
193.1
2323
Female, age 91, left hemisphere
179.5
1958
Male, age 80, both hemispheres
172.7
2451
Male, age 74, both hemispheres
138.9
2369
Female, age 85, left hemisphere
81.8
Superior olive nTPM: 179.4
1875
Female, age 85, both hemispheres
225.6
2329
Male, age 80, right hemisphere
182.8
2561
Female, age 91, both hemispheres
170.6
2020
Male, age 76, both hemispheres
167.9
2364
Male, age 74, right hemisphere
150.1
Ventral periolivary nuclei nTPM: 199.7
2130
Female, age 85, both hemispheres
259.8
2165
Male, age 80, both hemispheres
220.4
2794
Female, age 91, left hemisphere
165.3
2023
Male, age 76, both hemispheres
153.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 165.0
2449
Male, age 74, both hemispheres
201.4
1959
Male, age 76, both hemispheres
193.2
2840
Female, age 85, both hemispheres
173.2
2161
Male, age 80, both hemispheres
166.3
2456
Female, age 91, both hemispheres
133.0
2359
Male, age 61, both hemispheres
123.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
70.2
Pig sample
Sample description
nTPM
Pons nTPM: 70.2
Samples: 4
Max nTPM: 107.6
Min nTPM: 49.1
Sample A
Female
107.6
Sample B
Female
49.6
Sample C
Male
49.1
Sample D
Male
74.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
