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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
131.2
nTPM
Monaco:
178.6
nTPM
Schmiedel:
99.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.2
HPA sample
nTPM
gdT-cell nTPM: 82.3
Samples: 6
Max nTPM: 103.5
Min nTPM: 58.5
P10809_1007
58.5
P10809_1022
103.5
P10809_1041
93.0
P10809_1060
79.7
P10809_1077
74.2
P10809_1098
84.6
MAIT T-cell nTPM: 82.8
Samples: 6
Max nTPM: 123.5
Min nTPM: 61.7
P10809_1006
69.4
P10809_1024
123.5
P10809_1043
75.0
P10809_1062
80.6
P10809_1083
61.7
P10809_1097
86.4
Memory CD4 T-cell nTPM: 86.9
Samples: 6
Max nTPM: 107.9
Min nTPM: 73.5
P10809_1014
76.7
P10809_1026
100.9
P10809_1045
107.9
P10809_1064
73.5
P10809_1086
75.2
P10809_1113
86.9
Memory CD8 T-cell nTPM: 86.3
Samples: 5
Max nTPM: 97.7
Min nTPM: 66.8
P10809_1012
66.8
P10809_1027
93.1
P10809_1046
89.0
P10809_1065
84.8
P10809_1111
97.7
Naive CD4 T-cell nTPM: 87.0
Samples: 6
Max nTPM: 108.3
Min nTPM: 59.7
P10809_1015
59.7
P10809_1030
102.9
P10809_1049
108.3
P10809_1068
90.7
P10809_1085
86.6
P10809_1112
73.8
Naive CD8 T-cell nTPM: 88.4
Samples: 6
Max nTPM: 113.6
Min nTPM: 62.0
P10809_1016
62.0
P10809_1031
113.6
P10809_1050
82.5
P10809_1069
99.5
P10809_1087
81.1
P10809_1110
91.6
T-reg nTPM: 131.3
Samples: 6
Max nTPM: 158.2
Min nTPM: 107.7
P10809_1018
107.7
P10809_1037
136.4
P10809_1056
140.7
P10809_1075
109.8
P10809_1094
134.7
P10809_1106
158.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 120.9
Samples: 4
Max nTPM: 163.6
Min nTPM: 70.4
RHH5202_R3573
88.5
RHH5230_R3602
161.0
RHH5259_R3631
70.4
RHH5288_R3660
163.6
Effector memory CD8 T-cell nTPM: 178.6
Samples: 4
Max nTPM: 231.9
Min nTPM: 115.1
RHH5203_R3574
231.9
RHH5231_R3603
152.4
RHH5260_R3632
115.1
RHH5289_R3661
214.8
MAIT T-cell nTPM: 112.3
Samples: 4
Max nTPM: 127.7
Min nTPM: 96.1
RHH5233_R3605
127.7
RHH5205_R3576
96.1
RHH5262_R3634
113.6
RHH5297_R3663
111.8
Memory CD4 T-cell TFH nTPM: 165.8
Samples: 4
Max nTPM: 206.1
Min nTPM: 130.8
RHH5300_R3666
160.6
RHH5236_R3608
165.8
RHH5265_R3637
130.8
RHH5208_R3579
206.1
Memory CD4 T-cell Th1 nTPM: 137.0
Samples: 4
Max nTPM: 166.9
Min nTPM: 80.5
RHH5210_R3581
165.8
RHH5302_R3668
166.9
RHH5238_R3610
80.5
RHH5267_R3639
134.9
Memory CD4 T-cell Th1/Th17 nTPM: 140.4
Samples: 4
Max nTPM: 192.7
Min nTPM: 84.7
RHH5303_R3669
192.7
RHH5211_R3582
153.3
RHH5239_R3611
84.7
RHH5268_R3640
130.8
Memory CD4 T-cell Th17 nTPM: 132.8
Samples: 4
Max nTPM: 151.2
Min nTPM: 120.3
RHH5304_R3670
151.2
RHH5212_R3583
134.2
RHH5240_R3612
125.5
RHH5269_R3641
120.3
Memory CD4 T-cell Th2 nTPM: 118.0
Samples: 4
Max nTPM: 147.2
Min nTPM: 93.2
RHH5305_R3671
147.2
RHH5213_R3584
125.3
RHH5241_R3613
93.2
RHH5270_R3642
106.2
Naive CD4 T-cell nTPM: 153.8
Samples: 4
Max nTPM: 184.7
Min nTPM: 111.5
RHH5306_R3672
171.8
RHH5214_R3585
184.7
RHH5242_R3614
147.0
RHH5271_R3643
111.5
Naive CD8 T-cell nTPM: 149.5
Samples: 4
Max nTPM: 193.2
Min nTPM: 62.5
RHH5201_R3572
193.2
RHH5229_R3601
62.5
RHH5258_R3630
180.0
RHH5287_R3659
162.4
Non-Vd2 gdTCR nTPM: 140.1
Samples: 4
Max nTPM: 151.8
Min nTPM: 114.3
RHH5235_R3607
142.7
RHH5264_R3636
151.4
RHH5207_R3578
151.8
RHH5299_R3665
114.3
T-reg nTPM: 175.4
Samples: 4
Max nTPM: 252.0
Min nTPM: 130.2
RHH5301_R3667
148.9
RHH5237_R3609
252.0
RHH5266_R3638
130.2
RHH5209_R3580
170.6
Terminal effector memory CD4 T-cell nTPM: 125.6
Samples: 2
Max nTPM: 158.7
Min nTPM: 92.5
RHH5243_R3615
92.5
RHH5272_R3644
158.7
Terminal effector memory CD8 T-cell nTPM: 125.0
Samples: 4
Max nTPM: 145.2
Min nTPM: 104.9
RHH5232_R3604
145.2
RHH5204_R3575
124.3
RHH5261_R3633
104.9
RHH5296_R3662
125.7
Vd2 gdTCR nTPM: 114.3
Samples: 4
Max nTPM: 126.9
Min nTPM: 96.4
RHH5234_R3606
116.7
RHH5206_R3577
126.9
RHH5263_R3635
117.1
RHH5298_R3664
96.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
