HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:39.8 nTPM
HPA Brain:16.4 nTPM
GTEx:39.8 nTPM
FANTOM5:131.1 Scaled Tags Per Million
Pig:85.0 nTPM
Mouse:35.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026872Antibody CAB022108
Glial cells LowMedium
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 16.4
2621 Female, age 67, right hemisphere 31.1
1898 Male, age 80, left hemisphere 17.5
1855 Male, age 76, left hemisphere 17.4
1911 Female, age 85, right hemisphere 14.8
2148 Female, age 91, left hemisphere 9.4
2529 Female, age 94, left hemisphere 8.1
Dentate gyrus
nTPM: 11.9
2010 Male, age 76, both hemispheres 18.0
2531 Female, age 67, both hemispheres 14.8
2246 Female, age 85, both hemispheres 13.7
1927 Female, age 91, both hemispheres 11.0
2530 Female, age 94, left hemisphere 7.2
2528 Male, age 74, both hemispheres 6.8
Entorhinal gyrus
nTPM: 11.6
2117 Female, age 91, right hemisphere 18.3
1787 Male, age 76, left hemisphere 16.9
2613 Female, age 94, left hemisphere 10.5
1938 Female, age 85, left hemisphere 9.9
2764 Male, age 80, right hemisphere 7.9
2686 Male, age 75, right hemisphere 6.0
Hippocampus, CA1
nTPM: 10.3
2045 Male, age 76, both hemispheres 14.6
1873 Female, age 85, both hemispheres 11.3
2527 Male, age 74, both hemispheres 9.9
2082 Female, age 91, right hemisphere 9.3
2749 Male, age 80, left hemisphere 6.3
Hippocampus, CA2
nTPM: 14.5
1940 Female, age 85, left hemisphere 31.5
2437 Female, age 94, left hemisphere 16.2
1892 Male, age 76, both hemispheres 13.1
2113 Female, age 91, right hemisphere 11.7
2249 Male, age 74, both hemispheres 8.0
1963 Male, age 80, left hemisphere 6.8
Hippocampus, CA3
nTPM: 10.3
1867 Male, age 76, both hemispheres 16.3
2436 Male, age 74, both hemispheres 12.4
1891 Female, age 85, both hemispheres 11.8
2861 Female, age 67, both hemispheres 10.8
2137 Male, age 80, left hemisphere 6.2
2620 Female, age 94, left hemisphere 4.5
Parahippocampal cortex
nTPM: 13.3
2250 Female, age 67, right hemisphere 35.7
2018 Male, age 76, both hemispheres 20.8
2693 Female, age 94, both hemispheres 13.2
1850 Male, age 80, both hemispheres 11.3
2245 Female, age 91, both hemispheres 11.2
1990 Female, age 91, right hemisphere 9.6
2692 Male, age 74, both hemispheres 9.3
2532 Female, age 72, left hemisphere 8.6
1933 Female, age 85, both hemispheres 8.5
2622 Female, age 67, right hemisphere 4.8
Perirhinal gyrus
nTPM: 10.9
2521 Female, age 94, right hemisphere 17.9
2848 Male, age 76, right hemisphere 10.4
1794 Male, age 80, right hemisphere 10.2
1841 Female, age 85, right hemisphere 8.2
1847 Female, age 91, left hemisphere 7.9
Subiculum
nTPM: 15.1
2042 Male, age 76, both hemispheres 26.9
2438 Female, age 94, left hemisphere 17.4
1901 Male, age 80, both hemispheres 14.3
2729 Female, age 91, right hemisphere 12.4
2619 Male, age 74, both hemispheres 11.6
1977 Female, age 85, both hemispheres 7.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 389.4
Min nTPM: 2.4
Std nTPM: 41.6
Median nTPM: 27.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 389.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 174.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 166.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 165.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 155.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 148.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 147.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 146.6
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 129.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 121.1
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 103.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 131.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.1
FF:10169-103B7 60 years, female 184.8
FF:10153-102I9 76 years, female 77.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 85.0
Pig sample Sample description nTPM
Subiculum
nTPM: 79.0
Samples: 4

Max nTPM: 100.9
Min nTPM: 66.5
Sample A Female 100.9
Sample B Female 74.8
Sample C Male 66.5
Sample D Male 73.9
Dorsal hippocampus
nTPM: 85.0
Samples: 4

Max nTPM: 119.3
Min nTPM: 58.3
Sample A Female 101.0
Sample B Female 58.3
Sample C Male 119.3
Sample D Male 61.5
Entorhinal cortex
nTPM: 53.0
Samples: 4

Max nTPM: 64.9
Min nTPM: 44.5
Sample A Female 48.6
Sample B Female 54.1
Sample C Male 64.9
Sample D Male 44.5
Ventral hippocampus
nTPM: 76.8
Samples: 4

Max nTPM: 95.6
Min nTPM: 61.8
Sample A Female 69.6
Sample B Female 61.8
Sample C Male 95.6
Sample D Male 80.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.0
Samples: 4

Max nTPM: 36.5
Min nTPM: 32.0
Sample A Male 35.5
Sample B Male 32.0
Sample C Female 35.9
Sample D Female 36.5
Hippocampal formation
nTPM: 30.9
Samples: 4

Max nTPM: 33.3
Min nTPM: 28.3
Sample A Male 32.7
Sample B Male 29.3
Sample C Female 33.3
Sample D Female 28.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
100144165 Antisense, RP_110421_02_A02, Mouse strain C57BL/6J (56 days, male) 0.2

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