We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
22.0
nTPM
Monaco:
129.9
nTPM
Schmiedel:
88.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.0
HPA sample
nTPM
gdT-cell nTPM: 22.0
Samples: 6
Max nTPM: 28.6
Min nTPM: 10.9
P10809_1007
28.6
P10809_1022
26.9
P10809_1041
10.9
P10809_1060
23.5
P10809_1077
17.4
P10809_1098
24.4
MAIT T-cell nTPM: 18.3
Samples: 6
Max nTPM: 33.7
Min nTPM: 6.9
P10809_1006
33.7
P10809_1024
21.1
P10809_1043
10.6
P10809_1062
25.0
P10809_1083
12.4
P10809_1097
6.9
Memory CD4 T-cell nTPM: 16.6
Samples: 6
Max nTPM: 24.5
Min nTPM: 8.8
P10809_1014
24.5
P10809_1026
22.4
P10809_1045
8.8
P10809_1064
12.5
P10809_1086
12.3
P10809_1113
18.9
Memory CD8 T-cell nTPM: 16.5
Samples: 5
Max nTPM: 26.8
Min nTPM: 8.9
P10809_1012
26.8
P10809_1027
15.0
P10809_1046
8.9
P10809_1065
18.6
P10809_1111
13.1
Naive CD4 T-cell nTPM: 15.9
Samples: 6
Max nTPM: 25.7
Min nTPM: 4.5
P10809_1015
25.7
P10809_1030
12.2
P10809_1049
4.5
P10809_1068
21.1
P10809_1085
11.9
P10809_1112
20.2
Naive CD8 T-cell nTPM: 17.5
Samples: 6
Max nTPM: 29.7
Min nTPM: 9.4
P10809_1016
29.7
P10809_1031
17.8
P10809_1050
9.4
P10809_1069
18.9
P10809_1087
15.2
P10809_1110
14.0
T-reg nTPM: 21.5
Samples: 6
Max nTPM: 33.6
Min nTPM: 10.1
P10809_1018
33.6
P10809_1037
19.8
P10809_1056
10.1
P10809_1075
31.5
P10809_1094
14.9
P10809_1106
19.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 109.8
Samples: 4
Max nTPM: 136.8
Min nTPM: 91.7
RHH5202_R3573
91.7
RHH5230_R3602
117.5
RHH5259_R3631
136.8
RHH5288_R3660
93.1
Effector memory CD8 T-cell nTPM: 130.0
Samples: 4
Max nTPM: 182.3
Min nTPM: 85.0
RHH5203_R3574
85.0
RHH5231_R3603
140.2
RHH5260_R3632
182.3
RHH5289_R3661
112.4
MAIT T-cell nTPM: 88.9
Samples: 4
Max nTPM: 98.3
Min nTPM: 67.7
RHH5233_R3605
67.7
RHH5205_R3576
98.3
RHH5262_R3634
92.4
RHH5297_R3663
97.2
Memory CD4 T-cell TFH nTPM: 95.8
Samples: 4
Max nTPM: 128.4
Min nTPM: 76.5
RHH5300_R3666
76.5
RHH5236_R3608
86.1
RHH5265_R3637
92.1
RHH5208_R3579
128.4
Memory CD4 T-cell Th1 nTPM: 98.9
Samples: 4
Max nTPM: 119.7
Min nTPM: 55.1
RHH5210_R3581
55.1
RHH5302_R3668
119.7
RHH5238_R3610
113.9
RHH5267_R3639
106.7
Memory CD4 T-cell Th1/Th17 nTPM: 112.4
Samples: 4
Max nTPM: 144.8
Min nTPM: 74.1
RHH5303_R3669
109.7
RHH5211_R3582
120.8
RHH5239_R3611
144.8
RHH5268_R3640
74.1
Memory CD4 T-cell Th17 nTPM: 122.7
Samples: 4
Max nTPM: 151.8
Min nTPM: 94.1
RHH5304_R3670
127.8
RHH5212_R3583
117.2
RHH5240_R3612
151.8
RHH5269_R3641
94.1
Memory CD4 T-cell Th2 nTPM: 108.1
Samples: 4
Max nTPM: 131.1
Min nTPM: 86.3
RHH5305_R3671
131.1
RHH5213_R3584
109.9
RHH5241_R3613
86.3
RHH5270_R3642
105.2
Naive CD4 T-cell nTPM: 92.9
Samples: 4
Max nTPM: 111.6
Min nTPM: 67.0
RHH5306_R3672
108.9
RHH5214_R3585
67.0
RHH5242_R3614
84.2
RHH5271_R3643
111.6
Naive CD8 T-cell nTPM: 110.9
Samples: 4
Max nTPM: 151.9
Min nTPM: 94.0
RHH5201_R3572
101.8
RHH5229_R3601
151.9
RHH5258_R3630
95.7
RHH5287_R3659
94.0
Non-Vd2 gdTCR nTPM: 116.9
Samples: 4
Max nTPM: 168.4
Min nTPM: 93.2
RHH5235_R3607
103.1
RHH5264_R3636
168.4
RHH5207_R3578
93.2
RHH5299_R3665
103.0
T-reg nTPM: 98.0
Samples: 4
Max nTPM: 111.9
Min nTPM: 78.1
RHH5301_R3667
78.1
RHH5237_R3609
102.8
RHH5266_R3638
99.2
RHH5209_R3580
111.9
Terminal effector memory CD4 T-cell nTPM: 96.6
Samples: 2
Max nTPM: 97.6
Min nTPM: 95.6
RHH5243_R3615
97.6
RHH5272_R3644
95.6
Terminal effector memory CD8 T-cell nTPM: 109.3
Samples: 4
Max nTPM: 145.5
Min nTPM: 91.4
RHH5232_R3604
103.2
RHH5204_R3575
91.4
RHH5261_R3633
145.5
RHH5296_R3662
97.1
Vd2 gdTCR nTPM: 99.5
Samples: 4
Max nTPM: 139.4
Min nTPM: 72.8
RHH5234_R3606
91.1
RHH5206_R3577
94.5
RHH5263_R3635
139.4
RHH5298_R3664
72.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
