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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
149.0
nTPM
Monaco:
635.7
nTPM
Schmiedel:
402.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
149.0
HPA sample
nTPM
gdT-cell nTPM: 111.8
Samples: 6
Max nTPM: 132.6
Min nTPM: 98.0
P10809_1007
98.0
P10809_1022
108.2
P10809_1041
100.0
P10809_1060
119.2
P10809_1077
112.6
P10809_1098
132.6
MAIT T-cell nTPM: 131.3
Samples: 6
Max nTPM: 166.6
Min nTPM: 88.9
P10809_1006
166.6
P10809_1024
139.0
P10809_1043
88.9
P10809_1062
140.9
P10809_1083
119.4
P10809_1097
133.1
Memory CD4 T-cell nTPM: 131.8
Samples: 6
Max nTPM: 158.8
Min nTPM: 92.0
P10809_1014
147.2
P10809_1026
92.0
P10809_1045
99.1
P10809_1064
158.8
P10809_1086
139.2
P10809_1113
154.4
Memory CD8 T-cell nTPM: 137.6
Samples: 5
Max nTPM: 171.2
Min nTPM: 84.7
P10809_1012
164.5
P10809_1027
118.2
P10809_1046
84.7
P10809_1065
171.2
P10809_1111
149.4
Naive CD4 T-cell nTPM: 132.0
Samples: 6
Max nTPM: 180.2
Min nTPM: 62.8
P10809_1015
180.2
P10809_1030
121.9
P10809_1049
62.8
P10809_1068
144.0
P10809_1085
141.0
P10809_1112
141.8
Naive CD8 T-cell nTPM: 149.0
Samples: 6
Max nTPM: 173.5
Min nTPM: 119.7
P10809_1016
155.4
P10809_1031
134.0
P10809_1050
119.7
P10809_1069
173.5
P10809_1087
159.2
P10809_1110
152.4
T-reg nTPM: 118.2
Samples: 6
Max nTPM: 151.6
Min nTPM: 77.3
P10809_1018
151.6
P10809_1037
112.8
P10809_1056
77.3
P10809_1075
116.8
P10809_1094
115.3
P10809_1106
135.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
635.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 635.7
Samples: 4
Max nTPM: 676.7
Min nTPM: 592.1
RHH5202_R3573
676.7
RHH5230_R3602
644.2
RHH5259_R3631
629.6
RHH5288_R3660
592.1
Effector memory CD8 T-cell nTPM: 565.2
Samples: 4
Max nTPM: 617.5
Min nTPM: 532.4
RHH5203_R3574
569.2
RHH5231_R3603
617.5
RHH5260_R3632
541.5
RHH5289_R3661
532.4
MAIT T-cell nTPM: 514.3
Samples: 4
Max nTPM: 635.9
Min nTPM: 387.4
RHH5233_R3605
635.9
RHH5205_R3576
580.2
RHH5262_R3634
387.4
RHH5297_R3663
453.8
Memory CD4 T-cell TFH nTPM: 527.0
Samples: 4
Max nTPM: 628.9
Min nTPM: 443.4
RHH5300_R3666
443.4
RHH5236_R3608
628.9
RHH5265_R3637
448.3
RHH5208_R3579
587.2
Memory CD4 T-cell Th1 nTPM: 542.8
Samples: 4
Max nTPM: 705.5
Min nTPM: 398.6
RHH5210_R3581
577.0
RHH5302_R3668
490.1
RHH5238_R3610
705.5
RHH5267_R3639
398.6
Memory CD4 T-cell Th1/Th17 nTPM: 612.3
Samples: 4
Max nTPM: 839.1
Min nTPM: 438.1
RHH5303_R3669
499.7
RHH5211_R3582
672.1
RHH5239_R3611
839.1
RHH5268_R3640
438.1
Memory CD4 T-cell Th17 nTPM: 573.5
Samples: 4
Max nTPM: 769.6
Min nTPM: 434.8
RHH5304_R3670
544.8
RHH5212_R3583
544.8
RHH5240_R3612
769.6
RHH5269_R3641
434.8
Memory CD4 T-cell Th2 nTPM: 540.5
Samples: 4
Max nTPM: 620.2
Min nTPM: 424.9
RHH5305_R3671
519.1
RHH5213_R3584
620.2
RHH5241_R3613
597.8
RHH5270_R3642
424.9
Naive CD4 T-cell nTPM: 494.5
Samples: 4
Max nTPM: 605.5
Min nTPM: 390.8
RHH5306_R3672
470.9
RHH5214_R3585
510.9
RHH5242_R3614
605.5
RHH5271_R3643
390.8
Naive CD8 T-cell nTPM: 617.5
Samples: 4
Max nTPM: 883.1
Min nTPM: 409.0
RHH5201_R3572
588.8
RHH5229_R3601
883.1
RHH5258_R3630
409.0
RHH5287_R3659
588.9
Non-Vd2 gdTCR nTPM: 526.0
Samples: 4
Max nTPM: 664.1
Min nTPM: 390.0
RHH5235_R3607
664.1
RHH5264_R3636
511.3
RHH5207_R3578
538.7
RHH5299_R3665
390.0
T-reg nTPM: 425.3
Samples: 4
Max nTPM: 568.8
Min nTPM: 320.0
RHH5301_R3667
354.8
RHH5237_R3609
568.8
RHH5266_R3638
320.0
RHH5209_R3580
457.4
Terminal effector memory CD4 T-cell nTPM: 624.3
Samples: 2
Max nTPM: 741.0
Min nTPM: 507.6
RHH5243_R3615
741.0
RHH5272_R3644
507.6
Terminal effector memory CD8 T-cell nTPM: 548.8
Samples: 4
Max nTPM: 639.0
Min nTPM: 499.5
RHH5232_R3604
639.0
RHH5204_R3575
513.8
RHH5261_R3633
542.9
RHH5296_R3662
499.5
Vd2 gdTCR nTPM: 551.8
Samples: 4
Max nTPM: 610.7
Min nTPM: 420.3
RHH5234_R3606
594.7
RHH5206_R3577
581.5
RHH5263_R3635
610.7
RHH5298_R3664
420.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.