We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
23.6
nTPM
Monaco:
14.7
nTPM
Schmiedel:
24.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.6
HPA sample
nTPM
gdT-cell nTPM: 14.3
Samples: 6
Max nTPM: 17.9
Min nTPM: 9.0
P10809_1007
9.0
P10809_1022
16.6
P10809_1041
15.9
P10809_1060
13.7
P10809_1077
12.9
P10809_1098
17.9
MAIT T-cell nTPM: 14.4
Samples: 6
Max nTPM: 19.8
Min nTPM: 8.1
P10809_1006
8.1
P10809_1024
18.8
P10809_1043
17.5
P10809_1062
13.6
P10809_1083
19.8
P10809_1097
8.7
Memory CD4 T-cell nTPM: 15.8
Samples: 6
Max nTPM: 20.8
Min nTPM: 10.5
P10809_1014
10.5
P10809_1026
20.0
P10809_1045
20.8
P10809_1064
14.3
P10809_1086
13.8
P10809_1113
15.2
Memory CD8 T-cell nTPM: 16.6
Samples: 5
Max nTPM: 20.4
Min nTPM: 9.8
P10809_1012
9.8
P10809_1027
20.4
P10809_1046
15.6
P10809_1065
18.1
P10809_1111
19.3
Naive CD4 T-cell nTPM: 21.5
Samples: 6
Max nTPM: 37.5
Min nTPM: 10.5
P10809_1015
10.5
P10809_1030
15.4
P10809_1049
37.5
P10809_1068
24.1
P10809_1085
20.8
P10809_1112
20.7
Naive CD8 T-cell nTPM: 15.8
Samples: 6
Max nTPM: 20.5
Min nTPM: 10.1
P10809_1016
10.1
P10809_1031
14.5
P10809_1050
20.5
P10809_1069
14.7
P10809_1087
17.7
P10809_1110
17.1
T-reg nTPM: 23.6
Samples: 6
Max nTPM: 45.5
Min nTPM: 11.0
P10809_1018
11.0
P10809_1037
26.7
P10809_1056
45.5
P10809_1075
21.4
P10809_1094
15.8
P10809_1106
21.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 5.9
Samples: 4
Max nTPM: 7.8
Min nTPM: 3.9
RHH5202_R3573
5.8
RHH5230_R3602
6.0
RHH5259_R3631
7.8
RHH5288_R3660
3.9
Effector memory CD8 T-cell nTPM: 8.4
Samples: 4
Max nTPM: 11.6
Min nTPM: 6.6
RHH5203_R3574
8.8
RHH5231_R3603
6.6
RHH5260_R3632
6.6
RHH5289_R3661
11.6
MAIT T-cell nTPM: 9.2
Samples: 4
Max nTPM: 10.7
Min nTPM: 5.7
RHH5233_R3605
10.4
RHH5205_R3576
9.9
RHH5262_R3634
5.7
RHH5297_R3663
10.7
Memory CD4 T-cell TFH nTPM: 12.2
Samples: 4
Max nTPM: 22.5
Min nTPM: 5.6
RHH5300_R3666
5.6
RHH5236_R3608
22.5
RHH5265_R3637
9.4
RHH5208_R3579
11.2
Memory CD4 T-cell Th1 nTPM: 10.5
Samples: 4
Max nTPM: 12.8
Min nTPM: 7.8
RHH5210_R3581
11.0
RHH5302_R3668
12.8
RHH5238_R3610
7.8
RHH5267_R3639
10.3
Memory CD4 T-cell Th1/Th17 nTPM: 5.5
Samples: 4
Max nTPM: 9.0
Min nTPM: 3.1
RHH5303_R3669
5.6
RHH5211_R3582
9.0
RHH5239_R3611
3.1
RHH5268_R3640
4.3
Memory CD4 T-cell Th17 nTPM: 8.5
Samples: 4
Max nTPM: 12.2
Min nTPM: 5.3
RHH5304_R3670
8.9
RHH5212_R3583
12.2
RHH5240_R3612
7.5
RHH5269_R3641
5.3
Memory CD4 T-cell Th2 nTPM: 9.5
Samples: 4
Max nTPM: 11.1
Min nTPM: 6.7
RHH5305_R3671
10.4
RHH5213_R3584
11.1
RHH5241_R3613
9.7
RHH5270_R3642
6.7
Naive CD4 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 18.8
Min nTPM: 7.4
RHH5306_R3672
7.4
RHH5214_R3585
18.8
RHH5242_R3614
12.4
RHH5271_R3643
15.0
Naive CD8 T-cell nTPM: 12.6
Samples: 4
Max nTPM: 18.8
Min nTPM: 9.1
RHH5201_R3572
18.8
RHH5229_R3601
9.1
RHH5258_R3630
12.1
RHH5287_R3659
10.5
Non-Vd2 gdTCR nTPM: 10.1
Samples: 4
Max nTPM: 12.2
Min nTPM: 7.8
RHH5235_R3607
7.8
RHH5264_R3636
12.2
RHH5207_R3578
11.3
RHH5299_R3665
9.0
T-reg nTPM: 14.7
Samples: 4
Max nTPM: 19.9
Min nTPM: 9.6
RHH5301_R3667
16.9
RHH5237_R3609
19.9
RHH5266_R3638
12.3
RHH5209_R3580
9.6
Terminal effector memory CD4 T-cell nTPM: 8.4
Samples: 2
Max nTPM: 12.5
Min nTPM: 4.3
RHH5243_R3615
4.3
RHH5272_R3644
12.5
Terminal effector memory CD8 T-cell nTPM: 13.2
Samples: 4
Max nTPM: 15.7
Min nTPM: 9.6
RHH5232_R3604
9.6
RHH5204_R3575
15.7
RHH5261_R3633
13.5
RHH5296_R3662
14.0
Vd2 gdTCR nTPM: 10.2
Samples: 4
Max nTPM: 15.0
Min nTPM: 6.3
RHH5234_R3606
6.3
RHH5206_R3577
15.0
RHH5263_R3635
8.6
RHH5298_R3664
11.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
